Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25249 Brassica carinata HOM05D000405 ORTHO05D000712 1.7e-67 259.2 130 100.0
BcaB05g25243 Brassica carinata HOM05D000405 ORTHO05D000712 3.2e-42 175.3 97 89.7
Thhalv10000686m.g Eutrema salsugineum HOM05D000405 ORTHO05D000712 1.4e-29 133.3 98 72.4
BcaC03g15949 Brassica carinata HOM05D000405 ORTHO05D000712 2.3e-29 132.5 93 72.0
A02p23400 Brassica napus HOM05D000405 ORTHO05D000712 2.3e-29 132.5 93 72.0
C02p37100 Brassica napus HOM05D000405 ORTHO05D000712 3.1e-29 132.1 93 72.0
BolC2t09724H Brassica oleracea HOM05D000405 ORTHO05D000712 2.0e-28 129.4 93 71.0
A02p23350 Brassica napus HOM05D000405 ORTHO05D000712 2.2e-27 125.9 94 70.2
A02p23370 Brassica napus HOM05D000405 ORTHO05D000712 6.4e-27 124.4 93 69.9
BraA02t07329Z Brassica rapa HOM05D000405 ORTHO05D000712 1.9e-26 122.9 95 70.5
BraA02t07330Z Brassica rapa HOM05D000405 ORTHO05D000712 2.4e-26 122.5 93 68.8
BcaB05g25252 Brassica carinata HOM05D000405 ORTHO05D000712 3.2e-26 122.1 97 67.0
BcaB05g25250 Brassica carinata HOM05D000405 ORTHO05D000712 1.2e-25 120.2 98 67.3
BcaB05g25244 Brassica carinata HOM05D000405 ORTHO05D000712 5.6e-23 111.3 74 75.7
Sp5g35180 Schrenkiella parvula HOM05D000405 ORTHO05D000712 1.8e-21 106.3 94 63.8
BcaB04g17068 Brassica carinata HOM05D000405 ORTHO05D000712 9.9e-20 100.5 85 63.5
Thhalv10029232m.g Eutrema salsugineum HOM05D000405 ORTHO05D000712 1.2e-17 93.6 92 51.1
BraA02t07334Z Brassica rapa HOM05D000405 ORTHO05D000712 5.3e-13 78.2 64 65.6
AL2G24390 Arabidopsis lyrata HOM05D000405 ORTHO05D000712 1.3e-11 73.6 77 58.4
AT1G66560 Arabidopsis thaliana HOM05D000405 ORTHO05D000712 3.8e-11 72.0 85 50.6
CARHR058570 Cardamine hirsuta HOM05D000405 ORTHO05D000712 2.4e-10 69.3 82 50.0
AT1G66550 Arabidopsis thaliana HOM05D000405 ORTHO05D000712 1.6e-09 66.6 85 48.2
Carub.0002s0831 Capsella rubella HOM05D000405 ORTHO05D000712 2.3e-08 62.8 88 48.9
AL2G24400 Arabidopsis lyrata HOM05D000405 ORTHO05D000712 8.7e-08 60.8 91 44.0
AL2G24560 Arabidopsis lyrata HOM05D000405 ORTHO05D000712 2.5e-07 59.3 91 44.0
AL721U10030 Arabidopsis lyrata HOM05D000405 ORTHO05D000712 2.1e-06 56.2 63 44.4
Carub.0002s1262 Capsella rubella HOM05D000405 ORTHO05D000712 2.1e-06 56.2 76 50.0
AT1G66600 Arabidopsis thaliana HOM05D000405 ORTHO05D000712 6.2e-06 54.7 75 44.0


User provided reference genes

Program Settings