Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 1.4e-245 853.2 723 100.0
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-186 656.8 773 84.6
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 1.0e-134 485.0 459 67.1
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 5.1e-134 482.6 388 67.3
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-130 470.7 702 56.8
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 3.3e-117 426.8 325 72.0
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 5.9e-114 416.0 689 58.6
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 4.7e-103 379.8 537 60.7
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 7.0e-99 365.9 336 58.3
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 2.2e-84 317.8 287 61.0
BcaB01g04319 Brassica carinata HOM05D008316 ORTHO05D005130 9.2e-75 285.8 362 80.7
C08p07230 Brassica napus HOM05D008316 ORTHO05D005130 1.0e-73 282.3 151 88.1
C04p52530 Brassica napus HOM05D008316 ORTHO05D005130 1.3e-73 282.0 148 88.5
C07p22550 Brassica napus HOM05D008316 ORTHO05D005130 1.3e-73 282.0 151 88.1
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 2.7e-66 257.7 251 50.6
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 2.1e-63 248.1 252 50.0
BolC9t56608H Brassica oleracea HOM05D008316 ORTHO05D005130 3.4e-61 240.7 156 73.7
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 1.9e-56 224.9 157 69.4
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 4.3e-56 223.8 156 69.9
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 2.8e-55 221.1 157 68.8
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 4.8e-55 220.3 156 69.2
BcaB05g21986 Brassica carinata HOM05D008316 ORTHO05D005130 8.1e-55 219.5 221 51.1
BraA09t38863Z Brassica rapa HOM05D008316 ORTHO05D005130 5.6e-48 196.8 105 86.7
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 2.1e-42 178.3 532 33.6
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.7e-42 177.9 341 32.3
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 1.1e-40 172.6 322 37.3
C02p14930 Brassica napus HOM05D008316 ORTHO05D014956 9.6e-40 169.5 388 42.3
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 2.1e-39 168.3 341 32.8
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 3.7e-39 167.5 263 41.8
BcaB02g10640 Brassica carinata HOM05D003554 ORTHO05D005130 4.0e-38 164.1 259 39.8
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 4.0e-38 164.1 359 30.9
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 2.6e-37 161.4 331 33.8
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 4.5e-37 160.6 359 30.1
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 6.5e-36 156.8 369 30.6
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-35 155.6 369 30.1
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-35 155.6 380 30.0
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 2.5e-35 154.8 312 34.0
BcaC02g08561 Brassica carinata HOM05D008316 ORTHO05D014956 3.2e-35 154.5 86 86.0
BolC4t26823H Brassica oleracea HOM05D008316 ORTHO05D014956 3.2e-35 154.5 86 86.0
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 7.1e-35 153.3 337 32.6
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 9.3e-35 152.9 378 29.6
BcaC07g37687 Brassica carinata HOM05D003554 ORTHO05D005130 3.5e-34 151.0 253 40.3
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 4.6e-34 150.6 369 29.5
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.0e-33 147.9 320 30.3
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-31 142.1 154 47.4
C02p31360 Brassica napus HOM05D009532 ORTHO05D005130 2.2e-31 141.7 99 67.7
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.8e-31 140.6 349 28.9
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-30 139.0 375 27.5
BraA08t32672Z Brassica rapa HOM05D008316 ORTHO05D014956 2.4e-30 138.3 79 84.8
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.5e-29 135.6 370 27.6
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 2.6e-29 134.8 341 29.6
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 3.4e-29 134.4 370 28.9
Aa31sc538G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.7e-29 133.3 141 48.2
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 7.7e-29 133.3 356 28.9
Aa31LG7G10740 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.9e-28 131.3 153 41.8
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 3.8e-28 131.0 95 70.5
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 6.5e-28 130.2 126 47.6
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 8.5e-28 129.8 162 40.7
Aa31sc442G10 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.1e-27 129.4 119 50.4
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 1.4e-27 129.0 88 69.3
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.9e-27 128.6 150 43.3
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.2e-27 127.9 140 42.9
BolC5t32025H Brassica oleracea HOM05D003554 ORTHO05D005130 4.2e-27 127.5 150 45.3
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 5.5e-27 127.1 134 44.0
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.2e-26 125.9 115 53.0
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 2.7e-26 124.8 92 57.6
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 4.6e-26 124.0 128 44.5
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 1.0e-25 122.9 177 40.1
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 5.1e-25 120.6 447 28.4
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 8.8e-25 119.8 132 44.7
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 7.4e-24 116.7 133 43.6
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-23 115.2 133 43.6
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 2.4e-22 111.7 118 47.5
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 4.1e-22 110.9 136 42.6
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 1.2e-21 109.4 92 52.2
BolC8t48343H Brassica oleracea HOM05D008316 ORTHO05D014956 1.3e-20 105.9 362 46.4
C01p42550 Brassica napus HOM05D008316 ORTHO05D014956 1.7e-20 105.5 121 73.6
AT2G06420 Arabidopsis thaliana HOM05D003554 ORTHO05D005130 2.2e-20 105.1 133 44.4
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 2.9e-20 104.8 101 47.5
THA.LOC109116390 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.9e-19 102.1 247 27.9
Thhalv10009333m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 3.2e-19 101.3 130 40.0
Thhalv10009650m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 4.2e-19 100.9 110 42.7
Thhalv10009514m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 9.4e-19 99.8 110 41.8
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 1.2e-18 99.4 101 46.5
Thhalv10009683m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.6e-18 99.0 130 39.2
Thhalv10009941m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 2.7e-18 98.2 110 41.8
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 3.6e-18 97.8 101 45.5
CARHR213120 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.6e-18 97.8 81 53.1
THA.LOC104808464 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.9e-18 96.7 226 31.4
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.0e-17 94.7 141 39.7
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.9e-17 94.4 136 39.0
Thhalv10009369m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 5.1e-17 94.0 111 39.6
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.1e-17 94.0 169 36.1
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 8.8e-17 93.2 280 26.4
Thhalv10009627m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.1e-16 92.8 110 40.0
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.1e-16 92.8 215 32.6
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.5e-16 92.4 67 62.7
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.5e-16 92.4 151 37.1
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.5e-16 92.4 151 37.1
Thhalv10009620m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 2.0e-16 92.0 120 39.2
Thhalv10009711m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 2.0e-16 92.0 100 41.0
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 2.6e-16 91.7 83 50.6
THA.LOC104822529 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.3e-16 91.3 224 31.7
BcaC07g39489 Brassica carinata HOM05D009532 ORTHO05D013511 4.4e-16 90.9 82 52.4
THA.LOC104813280 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.4e-16 90.9 136 34.6
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 2.8e-15 88.2 165 36.4
THA.LOC104804655 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-15 88.2 114 35.1
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 3.7e-15 87.8 90 44.4
CARHR034150 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.7e-15 87.8 79 48.1
THA.LOC104810569 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.7e-15 87.8 111 36.0
THA.LOC104804766 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-15 86.7 132 37.1
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-15 86.7 115 37.4
BolC4t23182H Brassica oleracea HOM05D003554 ORTHO05D005130 1.4e-14 85.9 70 55.7
BcaC05g27442 Brassica carinata HOM05D003554 ORTHO05D005130 1.8e-14 85.5 67 55.2
THA.LOC104811332 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.8e-14 85.5 114 35.1
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.4e-14 85.1 125 38.4
THA.LOC104798651 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 3.1e-14 84.7 114 35.1
THA.LOC104816074 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.1e-14 84.7 132 31.8
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.1e-14 84.7 132 31.8
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.3e-14 84.0 114 35.1
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.0e-14 83.6 114 35.1
THA.LOC104809667 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.1e-14 83.2 114 34.2
THA.LOC104810611 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.1e-14 83.2 114 35.1
THA.LOC104810514 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.5e-13 82.4 114 33.3
THA.LOC104798650 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.0e-13 82.0 140 30.7
THA.LOC104815123 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.0e-13 82.0 142 31.0
THA.LOC104825824 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.6e-13 81.6 114 36.8
CARHR113350 Cardamine hirsuta HOM05D003554 ORTHO05D005130 4.5e-13 80.9 73 49.3
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.7e-13 80.1 137 32.1
C06p05550 Brassica napus HOM05D009532 ORTHO05D013511 7.7e-13 80.1 73 52.1
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 1.3e-12 79.3 72 50.0
C09p38200 Brassica napus HOM05D009532 ORTHO05D013511 1.7e-12 79.0 73 50.7
BolC5t32294H Brassica oleracea HOM05D009532 ORTHO05D013511 1.7e-12 79.0 73 50.7
BraA09t38753Z Brassica rapa HOM05D008825 ORTHO05D013031 1.7e-12 79.0 124 39.5
A08p07770 Brassica napus HOM05D009532 ORTHO05D013511 2.2e-12 78.6 73 49.3
BraA06t24764Z Brassica rapa HOM05D009532 ORTHO05D013511 2.2e-12 78.6 73 49.3
THA.LOC104803467 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.8e-12 77.8 127 35.4
C06p04000 Brassica napus HOM05D009532 ORTHO05D013511 5.0e-12 77.4 73 49.3
C08p25340 Brassica napus HOM05D009532 ORTHO05D013511 5.0e-12 77.4 73 49.3
BolC8t48188H Brassica oleracea HOM05D009532 ORTHO05D013511 5.0e-12 77.4 73 49.3
BolC8t50155H Brassica oleracea HOM05D009532 ORTHO05D013511 5.0e-12 77.4 73 49.3
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 6.5e-12 77.0 169 31.4
BolC9t56660H Brassica oleracea HOM05D009532 ORTHO05D013511 3.2e-11 74.7 73 47.9
THA.LOC104803478 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-11 73.9 89 41.6
THA.LOC104821602 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-11 73.9 114 36.0
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.2e-11 73.6 63 52.4
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 2.7e-10 71.6 96 44.8
BraA03t15707Z Brassica rapa HOM05D003554 ORTHO05D005130 2.7e-10 71.6 104 37.5
BolC7t42790H Brassica oleracea HOM05D008316 ORTHO05D014956 8.0e-10 70.1 37 86.5
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.4e-09 69.3 99 39.4
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 1.8e-09 68.9 224 29.0
BraA01t01424Z Brassica rapa HOM05D008316 ORTHO05D014956 1.8e-09 68.9 37 86.5
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 3.9e-09 67.8 86 38.4
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.7e-09 67.0 84 44.0
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.7e-09 67.0 84 44.0
BolC9t56606H Brassica oleracea HOM05D008316 ORTHO05D014956 8.8e-09 66.6 36 83.3
BcaC07g37797 Brassica carinata HOM05D009532 ORTHO05D013511 1.1e-08 66.2 60 51.7
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.3e-08 64.7 91 38.5
BcaC09g49872 Brassica carinata HOM05D008825 ORTHO05D015484 1.3e-07 62.8 135 60.7
C07p22540 Brassica napus HOM05D008316 ORTHO05D018797 1.7e-07 62.4 84 50.0
A07p06500 Brassica napus HOM05D008825 ORTHO05D013031 3.7e-07 61.2 106 35.8
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 4.8e-07 60.8 125 32.0
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 4.8e-07 60.8 157 40.8
THA.LOC104825207 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-07 60.1 63 41.3
THA.LOC104827496 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-07 60.1 60 43.3
BcaC01g05681 Brassica carinata HOM05D009532 ORTHO05D013511 1.1e-06 59.7 74 41.9
BcaB02g10458 Brassica carinata HOM05D008316 ORTHO05D018718 1.8e-06 58.9 56 66.1
A08p06560 Brassica napus HOM05D008316 ORTHO05D021631 2.4e-06 58.5 31 80.6
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 2.4e-06 58.5 96 37.5
BraA08t32671Z Brassica rapa HOM05D008316 ORTHO05D021631 2.4e-06 58.5 31 80.6
BcaC01g00119 Brassica carinata HOM05D003554 ORTHO05D014926 3.1e-06 58.2 90 42.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-06 57.8 83 42.2
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 5.3e-06 57.4 83 44.6
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 5.3e-06 57.4 96 37.5
THA.LOC104827521 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.3e-06 57.4 62 43.5
BolC3t20187H Brassica oleracea HOM05D017905 ORTHO05D018718 7.0e-06 57.0 132 65.2
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 7.0e-06 57.0 103 33.0
Thhalv10009575m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 7.0e-06 57.0 64 39.1
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 9.1e-06 56.6 66 45.5
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 9.1e-06 56.6 106 34.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 9.1e-06 56.6 96 36.5


User provided reference genes

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