Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 4.7e-29 130.6 68 100.0
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-16 87.8 46 97.8
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-14 82.8 46 93.5
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-14 82.8 46 93.5
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 3.2e-14 81.3 46 91.3
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 3.2e-14 81.3 46 91.3
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 3.2e-14 81.3 46 91.3
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 4.8e-10 67.4 48 75.0
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 6.3e-10 67.0 67 61.2
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.8e-09 65.5 48 75.0
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 4.1e-09 64.3 48 72.9
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 4.1e-09 64.3 45 80.0
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 4.1e-09 64.3 48 72.9
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 5.4e-09 63.9 46 76.1
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 5.4e-09 63.9 48 72.9
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 5.4e-09 63.9 46 76.1
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 7.0e-09 63.5 49 69.4
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 9.1e-09 63.2 45 77.8
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.2e-08 62.8 46 73.9
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-08 62.8 46 76.1
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-08 62.8 48 72.9
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.2e-08 62.8 46 73.9
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-08 62.4 45 75.6
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-08 62.4 48 70.8
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-08 62.4 45 75.6
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.6e-08 62.4 48 70.8
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 1.6e-08 62.4 45 75.6
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.6e-08 62.4 45 75.6
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.7e-08 61.6 48 68.8
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-08 61.2 58 63.8
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 5.9e-08 60.5 48 68.8
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 5.9e-08 60.5 45 75.6
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.0e-07 59.7 48 68.8
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-07 59.3 47 70.2
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-07 58.9 43 74.4
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 3.8e-07 57.8 46 73.9
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 3.8e-07 57.8 46 73.9
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.6e-07 57.0 44 72.7
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 4.2e-06 54.3 53 58.5
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 4.2e-06 54.3 53 58.5
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 5.5e-06 53.9 43 72.1


User provided reference genes

Program Settings