Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 2.6e-21 104.8 65 100.0
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 7.4e-16 86.7 46 97.8
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 5.3e-14 80.5 48 87.5
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 5.3e-14 80.5 48 87.5
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 6.9e-14 80.1 47 89.4
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-13 79.0 48 85.4
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-13 79.0 48 85.4
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.5e-08 62.4 47 74.5
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 2.5e-08 61.6 45 77.8
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.3e-08 61.2 47 72.3
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 3.3e-08 61.2 47 72.3
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.3e-08 61.2 47 72.3
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 4.3e-08 60.8 46 73.9
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 4.3e-08 60.8 47 72.3
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 5.7e-08 60.5 45 75.6
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 7.4e-08 60.1 47 70.2
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 7.4e-08 60.1 47 72.3
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 7.4e-08 60.1 46 71.7
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 7.4e-08 60.1 47 70.2
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 9.7e-08 59.7 45 73.3
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 9.7e-08 59.7 45 73.3
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 9.7e-08 59.7 45 73.3
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 9.7e-08 59.7 45 73.3
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-07 59.3 47 70.2
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.3e-07 59.3 47 70.2
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.3e-07 59.3 47 70.2
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-07 58.9 50 68.0
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 3.7e-07 57.8 45 73.3
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.8e-07 57.4 47 66.0
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 4.8e-07 57.4 47 68.1
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 6.3e-07 57.0 46 69.6
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.8e-06 55.5 47 66.0
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-06 55.1 50 66.0
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-06 55.1 46 67.4
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.4e-06 55.1 46 71.7
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.4e-06 55.1 46 71.7
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.4e-06 55.1 44 72.7


User provided reference genes

Program Settings