Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-33 146.4 101 100.0
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-20 102.8 108 76.9
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-20 102.8 108 76.9
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 4.5e-20 101.3 108 72.2
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 4.5e-20 101.3 108 75.9
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 4.8e-14 81.3 46 91.3
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 6.3e-14 80.9 47 89.4
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 7.2e-10 67.4 95 65.3
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 3.6e-09 65.1 47 76.6
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 8.0e-09 63.9 47 74.5
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 8.0e-09 63.9 47 74.5
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 8.0e-09 63.9 47 74.5
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-08 63.5 47 74.5
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-08 63.5 47 74.5
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.0e-08 63.5 47 74.5
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.0e-08 63.5 47 74.5
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 1.4e-08 63.2 46 76.1
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.8e-08 62.8 47 72.3
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 1.8e-08 62.8 47 74.5
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 1.8e-08 62.8 45 77.8
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.8e-08 62.8 47 72.3
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.3e-08 62.4 46 73.9
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 4.0e-08 61.6 45 75.6
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 5.2e-08 61.2 47 72.3
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 6.7e-08 60.8 45 73.3
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 6.7e-08 60.8 45 73.3
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 6.7e-08 60.8 45 73.3
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 6.7e-08 60.8 45 73.3
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 1.5e-07 59.7 106 60.4
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.6e-07 58.9 45 73.3
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 4.4e-07 58.2 132 39.4
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.3e-06 56.6 47 68.1
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.3e-06 56.6 44 72.7
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 1.7e-06 56.2 46 71.7
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 1.7e-06 56.2 46 71.7
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.2e-06 55.8 47 66.0
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 2.2e-06 55.8 43 72.1


User provided reference genes

Program Settings