Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 3.1e-33 145.2 116 100.0
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 4.1e-33 144.8 115 100.0
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 9.1e-33 143.7 116 98.3
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-32 143.3 115 94.8
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 4.0e-20 101.7 108 76.9
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.5e-14 83.2 115 78.3
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 1.5e-14 83.2 115 78.3
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 2.5e-14 82.4 115 61.7
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-13 79.7 46 91.3
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-13 78.6 48 85.4
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 6.8e-12 74.3 54 77.8
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.2e-11 73.6 115 73.9
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.5e-11 73.2 132 65.9
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 9.8e-11 70.5 115 70.4
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.2e-10 69.3 115 72.2
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 2.2e-10 69.3 115 70.4
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 2.8e-10 68.9 51 76.5
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.4e-09 66.6 49 77.6
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.1e-09 65.5 49 75.5
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 4.1e-09 65.1 115 71.3
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 7.0e-09 64.3 47 76.6
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-08 63.2 47 76.6
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 3.5e-08 62.0 46 76.1
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 4.5e-08 61.6 50 68.0
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 5.9e-08 61.2 53 71.7
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 5.9e-08 61.2 48 72.9
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 7.7e-08 60.8 52 67.3
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.0e-07 60.5 45 75.6
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.3e-07 60.1 52 65.4
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-07 59.7 45 73.3
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-07 59.7 45 73.3
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 1.7e-07 59.7 45 73.3
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.7e-07 59.7 45 73.3
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.6e-07 57.8 45 73.3
BcaB05g25106 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-06 57.0 28 96.4
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 1.9e-06 56.2 56 62.5
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.5e-06 55.8 44 72.7
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 4.2e-06 55.1 43 72.1
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 4.2e-06 55.1 46 71.7
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 4.2e-06 55.1 46 71.7
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 7.2e-06 54.3 56 60.7
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 7.2e-06 54.3 56 58.9
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 9.5e-06 53.9 56 60.7
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 9.5e-06 53.9 56 62.5


User provided reference genes

Program Settings