Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 1.4e-33 146.4 116 100.0
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 1.8e-33 146.0 115 96.5
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 2.0e-32 142.5 116 98.3
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 2.6e-32 142.1 115 98.3
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-19 99.8 108 75.9
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 2.5e-14 82.4 115 77.4
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 2.5e-14 82.4 115 77.4
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 5.5e-14 81.3 115 61.7
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 7.2e-14 80.9 46 93.5
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-13 79.7 48 87.5
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 8.8e-12 73.9 115 73.9
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-11 73.6 54 77.8
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 2.6e-11 72.4 132 65.2
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 3.4e-11 72.0 115 71.3
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.7e-10 69.7 115 72.2
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-10 69.7 51 78.4
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.7e-10 69.7 115 70.4
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 6.3e-10 67.8 49 79.6
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.4e-09 66.6 49 77.6
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.1e-09 65.5 115 71.3
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 4.1e-09 65.1 47 78.7
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 9.1e-09 63.9 47 78.7
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 1.6e-08 63.2 46 78.3
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 2.7e-08 62.4 53 73.6
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.7e-08 62.4 50 70.0
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 4.5e-08 61.6 45 77.8
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 5.9e-08 61.2 52 67.3
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 7.7e-08 60.8 45 75.6
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 7.7e-08 60.8 45 75.6
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 7.7e-08 60.8 45 75.6
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 7.7e-08 60.8 48 72.9
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 7.7e-08 60.8 45 75.6
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.0e-07 60.5 52 67.3
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.9e-07 58.9 45 75.6
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 8.6e-07 57.4 57 63.2
BcaB05g25106 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-06 57.0 28 96.4
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 1.9e-06 56.2 46 73.9
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 1.9e-06 56.2 46 73.9
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 1.9e-06 56.2 57 64.9
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 3.3e-06 55.5 45 71.1
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 3.3e-06 55.5 57 59.6
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 3.3e-06 55.5 44 72.7
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 4.2e-06 55.1 57 61.4
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 7.2e-06 54.3 57 61.4
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 7.2e-06 54.3 57 61.4
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 9.5e-06 53.9 56 60.7
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 9.5e-06 53.9 57 61.4
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 9.5e-06 53.9 57 61.4


User provided reference genes

Program Settings