Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 2.0e-41 172.6 125 100.0
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-36 156.8 125 94.4
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 3.4e-33 145.2 115 96.5
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 4.9e-32 141.4 115 94.8
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-19 98.6 108 72.2
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.4e-18 96.7 125 75.2
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 1.4e-18 96.7 125 75.2
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-18 95.9 125 60.8
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.7e-16 88.6 125 72.0
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.1e-15 87.0 124 71.0
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 1.4e-15 86.7 125 69.6
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.4e-15 86.7 142 64.1
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 9.2e-15 84.0 132 65.2
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.6e-14 83.2 125 69.6
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 7.8e-14 80.9 125 69.6
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 7.8e-14 80.9 46 93.5
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.3e-13 80.1 125 69.6
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-13 79.7 48 87.5
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.0e-13 79.0 125 68.8
BcaB05g25106 Brassica carinata HOM05D004131 ORTHO05D004778 7.3e-12 74.3 38 97.4
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.6e-11 73.2 125 64.0
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-09 67.0 125 67.2
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 4.4e-09 65.1 47 78.7
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 4.4e-09 65.1 144 58.3
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 5.8e-09 64.7 126 65.9
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 5.8e-09 64.7 138 55.1
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 2.2e-08 62.8 134 60.4
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.9e-08 62.4 50 70.0
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.7e-08 62.0 140 57.9
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 4.9e-08 61.6 120 44.2
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 4.9e-08 61.6 120 44.2
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 6.4e-08 61.2 52 67.3
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 8.3e-08 60.8 45 75.6
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 8.3e-08 60.8 45 75.6
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 8.3e-08 60.8 48 72.9
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.1e-07 60.5 52 67.3
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 7.1e-07 57.8 141 56.0
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 9.2e-07 57.4 57 63.2
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.1e-06 56.2 46 73.9
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.1e-06 56.2 46 73.9
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 2.1e-06 56.2 57 64.9
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.7e-06 55.8 134 59.7
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 2.7e-06 55.8 139 52.5
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-06 55.5 45 71.1
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 3.5e-06 55.5 57 59.6
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 3.5e-06 55.5 44 72.7
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 4.6e-06 55.1 149 52.3
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 4.6e-06 55.1 57 61.4
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 6.0e-06 54.7 128 55.5
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 7.8e-06 54.3 57 61.4
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 7.8e-06 54.3 57 61.4


User provided reference genes

Program Settings