Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24988 Brassica carinata HOM05D001595 ORTHO05D001573 1.3e-28 129.0 63 100.0
BcaC03g15699 Brassica carinata HOM05D001595 ORTHO05D001573 1.6e-15 85.5 56 75.0
C02p32800 Brassica napus HOM05D001595 ORTHO05D001573 1.6e-15 85.5 56 75.0
BolC2t09419H Brassica oleracea HOM05D001595 ORTHO05D001573 1.6e-15 85.5 56 75.0
BraA02t07118Z Brassica rapa HOM05D001595 ORTHO05D001573 2.7e-15 84.7 56 75.0
A02p20870 Brassica napus HOM05D001595 ORTHO05D001573 2.3e-14 81.6 56 73.2
Sp5g31900 Schrenkiella parvula HOM05D001595 ORTHO05D001573 9.7e-13 76.3 48 75.0
BcaB05g25008 Brassica carinata HOM05D001595 ORTHO05D001573 4.1e-11 70.9 56 67.9
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 4.1e-11 70.9 56 67.9
BcaC03g15653 Brassica carinata HOM05D001595 ORTHO05D094001 1.5e-10 68.9 58 65.5
BcaC03g15660 Brassica carinata HOM05D001595 ORTHO05D093954 1.5e-10 68.9 58 65.5
Thhalv10019517m.g Eutrema salsugineum HOM05D001595 ORTHO05D001573 1.7e-09 65.5 53 64.2
CARHR070290 Cardamine hirsuta HOM05D001595 ORTHO05D001573 8.5e-09 63.2 44 68.2
AL2G36900 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 1.4e-08 62.4 46 67.4
AT1G76750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 1.2e-07 59.3 45 66.7
Carub.0002s2366 Capsella rubella HOM05D001595 ORTHO05D001573 3.6e-07 57.8 48 58.3
A07p28370 Brassica napus HOM05D001595 ORTHO05D001573 1.8e-06 55.5 48 58.3
BcaB02g07075 Brassica carinata HOM05D001595 ORTHO05D001573 5.1e-06 53.9 48 58.3
BcaB02g07121 Brassica carinata HOM05D001595 ORTHO05D001573 6.7e-06 53.5 48 56.2


User provided reference genes

Program Settings