Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24979 Brassica carinata HOM05D002666 ORTHO05D011316 7.4e-189 663.7 329 100.0
C02p33140 Brassica napus HOM05D002666 ORTHO05D011316 7.6e-109 397.9 383 61.1
A02p20580 Brassica napus HOM05D002666 ORTHO05D011316 8.4e-108 394.4 328 66.8
BcaC03g15649 Brassica carinata HOM05D002666 ORTHO05D011316 4.3e-96 355.5 330 61.2
BcaB05g24982 Brassica carinata HOM05D002666 ORTHO05D011316 4.2e-83 312.4 196 85.7
BraA02t07088Z Brassica rapa HOM05D002666 ORTHO05D011316 9.7e-80 301.2 307 59.3
BcaB05g24983 Brassica carinata HOM05D002666 ORTHO05D011316 8.2e-63 245.0 115 100.0
BcaC07g40314 Brassica carinata HOM05D002666 ORTHO05D011316 1.0e-57 228.0 385 43.9
BraA02t07093Z Brassica rapa HOM05D002666 ORTHO05D011316 6.7e-57 225.3 388 42.3
BcaB05g24980 Brassica carinata HOM05D002666 ORTHO05D011316 8.8e-57 224.9 414 40.3
BolC2t09373H Brassica oleracea HOM05D002666 ORTHO05D011316 3.3e-56 223.0 384 43.0
BcaB05g24978 Brassica carinata HOM05D002666 ORTHO05D011316 9.7e-56 221.5 376 42.3
A02p20540 Brassica napus HOM05D002666 ORTHO05D011316 9.7e-56 221.5 393 42.7
BcaC03g15657 Brassica carinata HOM05D002666 ORTHO05D011316 1.3e-55 221.1 392 42.1
C02p33270 Brassica napus HOM05D002666 ORTHO05D011316 8.2e-55 218.4 391 41.9
BcaC03g15663 Brassica carinata HOM05D002666 ORTHO05D011316 9.1e-54 214.9 394 41.1
A02p20590 Brassica napus HOM05D002666 ORTHO05D011316 9.1e-54 214.9 415 39.5
BraA02t07089Z Brassica rapa HOM05D002666 ORTHO05D011316 1.6e-53 214.2 418 39.7
BolC2t09384H Brassica oleracea HOM05D002666 ORTHO05D011316 1.3e-52 211.1 409 39.9
C08p34310 Brassica napus HOM05D002666 ORTHO05D011316 3.8e-52 209.5 412 40.3
BolC8t51029H Brassica oleracea HOM05D002666 ORTHO05D011316 3.8e-52 209.5 412 40.3
BraA02t07086Z Brassica rapa HOM05D002666 ORTHO05D011316 8.0e-50 201.8 392 40.3
C02p33180 Brassica napus HOM05D002666 ORTHO05D011316 4.8e-47 192.6 377 40.6
BcaB05g24977 Brassica carinata HOM05D002666 ORTHO05D011316 1.2e-45 188.0 382 40.8
C02p33130 Brassica napus HOM05D002666 ORTHO05D011316 1.7e-39 167.5 355 38.6
Carub.0004s2120 Capsella rubella HOM05D002666 ORTHO05D011316 1.6e-34 151.0 141 51.8
BraA02t07090Z Brassica rapa HOM05D002666 ORTHO05D011316 1.4e-33 147.9 183 48.1
BolC2t09385H Brassica oleracea HOM05D002666 ORTHO05D011316 5.2e-33 146.0 149 54.4
C02p33170 Brassica napus HOM05D002666 ORTHO05D011316 2.0e-32 144.1 187 46.5
BcaC03g15664 Brassica carinata HOM05D002666 ORTHO05D011316 4.4e-32 142.9 112 64.3
Carub.0002s0722 Capsella rubella HOM05D002666 ORTHO05D004769 3.7e-31 139.8 140 47.1
AL8G27040 Arabidopsis lyrata HOM05D002666 ORTHO05D011316 5.4e-30 136.0 142 48.6
Thhalv10000285m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 6.6e-28 129.0 134 47.8
Aa31LG8G17520 Aethionema arabicum HOM05D002666 ORTHO05D004769 5.6e-27 125.9 132 47.0
C02p33110 Brassica napus HOM05D002666 ORTHO05D011316 5.6e-27 125.9 185 44.9
Carub.0004s2646 Capsella rubella HOM05D002666 ORTHO05D004769 9.5e-27 125.2 142 45.8
AL4G25770 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 8.0e-26 122.1 138 44.9
Aa31LG4G17100 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.8e-25 120.9 130 45.4
CARHR135320 Cardamine hirsuta HOM05D002666 ORTHO05D004769 2.3e-25 120.6 128 45.3
Aa31LG4G17090 Aethionema arabicum HOM05D002666 ORTHO05D004769 8.9e-25 118.6 130 45.4
AL4G38020 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.2e-24 118.2 133 45.1
Carub.0004s2249 Capsella rubella HOM05D002666 ORTHO05D004769 3.4e-24 116.7 127 42.5
CARHR111260 Cardamine hirsuta HOM05D002666 ORTHO05D004769 3.4e-24 116.7 132 44.7
CARHR111270 Cardamine hirsuta HOM05D002666 ORTHO05D004769 3.4e-24 116.7 133 45.1
CARHR135310 Cardamine hirsuta HOM05D002666 ORTHO05D004769 3.4e-24 116.7 127 44.1
Aa31LG8G14950 Aethionema arabicum HOM05D002666 ORTHO05D004769 4.4e-24 116.3 133 45.9
A04p29060 Brassica napus HOM05D002666 ORTHO05D004769 7.0e-22 109.0 138 40.6
BolC4t28134H Brassica oleracea HOM05D002666 ORTHO05D004769 7.0e-22 109.0 138 40.6
AL4G37990 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.0e-21 107.5 129 41.1
Carub.0007s2103 Capsella rubella HOM05D002666 ORTHO05D004769 3.5e-21 106.7 105 50.5
Thhalv10024136m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 3.5e-21 106.7 135 41.5
Aa31LG8G17540 Aethionema arabicum HOM05D002666 ORTHO05D004769 7.8e-21 105.5 132 41.7
BcaB01g00108 Brassica carinata HOM05D002666 ORTHO05D004769 1.3e-20 104.8 127 43.3
A09p48260 Brassica napus HOM05D002666 ORTHO05D004769 2.3e-20 104.0 127 43.3
BraA09t40279Z Brassica rapa HOM05D002666 ORTHO05D004769 2.3e-20 104.0 127 43.3
Aa31LG11G11570 Aethionema arabicum HOM05D000011 ORTHO05D000018 3.0e-20 103.6 129 43.4
BcaC07g39850 Brassica carinata HOM05D002666 ORTHO05D004769 3.9e-20 103.2 127 41.7
C08p30560 Brassica napus HOM05D002666 ORTHO05D004769 3.9e-20 103.2 127 41.7
BcaC07g39854 Brassica carinata HOM05D002666 ORTHO05D004769 5.0e-20 102.8 127 42.5
BcaNung03124 Brassica carinata HOM05D002666 ORTHO05D004769 5.0e-20 102.8 132 41.7
BolC8t50673H Brassica oleracea HOM05D002666 ORTHO05D004769 5.0e-20 102.8 127 42.5
BraA09t38385Z Brassica rapa HOM05D002666 ORTHO05D011316 6.6e-20 102.4 67 70.1
BraA02t07094Z Brassica rapa HOM05D002666 ORTHO05D011316 8.6e-20 102.1 67 70.1
AL7G22850 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.5e-19 101.3 133 37.6
C08p30530 Brassica napus HOM05D002666 ORTHO05D004769 3.3e-19 100.1 127 41.7
A01p06820 Brassica napus HOM05D002666 ORTHO05D004769 4.3e-19 99.8 132 42.4
BraA01t00634Z Brassica rapa HOM05D002666 ORTHO05D004769 4.3e-19 99.8 132 42.4
BraA04t18378Z Brassica rapa HOM05D002666 ORTHO05D004769 7.3e-19 99.0 138 38.4
BcaNung03123 Brassica carinata HOM05D002666 ORTHO05D004769 1.6e-18 97.8 131 41.2
AT2G20620 Arabidopsis thaliana HOM05D002666 ORTHO05D004769 2.1e-18 97.4 132 43.9
BcaB01g02539 Brassica carinata HOM05D002666 ORTHO05D004769 2.1e-18 97.4 147 37.4
Aa31LG2G19600 Aethionema arabicum HOM05D002666 ORTHO05D004769 3.6e-18 96.7 140 41.4
BcaC02g07340 Brassica carinata HOM05D002666 ORTHO05D004769 3.6e-18 96.7 128 39.8
A01p06350 Brassica napus HOM05D002666 ORTHO05D004769 1.1e-17 95.1 130 41.5
BraA01t00600Z Brassica rapa HOM05D002666 ORTHO05D004769 1.1e-17 95.1 130 41.5
AL7G22830 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.4e-17 94.7 134 34.3
BcaC02g07369 Brassica carinata HOM05D002666 ORTHO05D004769 1.8e-17 94.4 132 40.2
A02p20600 Brassica napus HOM05D002666 ORTHO05D011316 3.1e-17 93.6 67 67.2
BolC1t00942H Brassica oleracea HOM05D002666 ORTHO05D004769 6.8e-17 92.4 128 39.8
BcaC09g52215 Brassica carinata HOM05D002666 ORTHO05D004769 1.2e-16 91.7 128 39.8
AL3G53700 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.6e-16 90.5 130 41.5
AL7G22800 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.6e-16 90.5 134 34.3
Carub.0007s1098 Capsella rubella HOM05D002666 ORTHO05D004769 2.6e-16 90.5 138 35.5
Sp5g20790 Schrenkiella parvula HOM05D002666 ORTHO05D004769 9.8e-16 88.6 106 41.5
Aa31LG11G11580 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.3e-15 88.2 129 38.8
Aa31LG2G16630 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.3e-15 88.2 120 40.8
AT4G29550 Arabidopsis thaliana HOM05D002666 ORTHO05D004769 2.2e-15 87.4 137 33.6
C01p07590 Brassica napus HOM05D002666 ORTHO05D004769 2.9e-15 87.0 155 34.8
BolC1t00739H Brassica oleracea HOM05D002666 ORTHO05D004769 2.9e-15 87.0 155 34.8
C01p09190 Brassica napus HOM05D002666 ORTHO05D012460 3.7e-15 86.7 141 35.5
BolC1t00911H Brassica oleracea HOM05D002666 ORTHO05D012460 3.7e-15 86.7 141 35.5
AL1G32040 Arabidopsis lyrata HOM05D002666 ORTHO05D031417 4.9e-15 86.3 183 37.2
AL1G32170 Arabidopsis lyrata HOM05D002666 ORTHO05D031417 4.9e-15 86.3 179 36.3
BcaC09g52209 Brassica carinata HOM05D002666 ORTHO05D004769 6.4e-15 85.9 128 39.1
C01p09850 Brassica napus HOM05D002666 ORTHO05D004769 6.4e-15 85.9 128 39.1
BolC1t00947H Brassica oleracea HOM05D002666 ORTHO05D004769 6.4e-15 85.9 128 39.1
BraA01t00797Z Brassica rapa HOM05D002666 ORTHO05D004769 8.3e-15 85.5 128 37.5
Aa31LG2G14750 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.9e-14 84.3 162 32.1
BraA01t00796Z Brassica rapa HOM05D002666 ORTHO05D004769 1.9e-14 84.3 127 38.6
A01p08490 Brassica napus HOM05D002666 ORTHO05D004769 3.2e-14 83.6 127 38.6
C01p09920 Brassica napus HOM05D002666 ORTHO05D004769 3.2e-14 83.6 176 34.7
BolC1t00954H Brassica oleracea HOM05D002666 ORTHO05D004769 3.2e-14 83.6 176 34.7
Thhalv10027039m.g Eutrema salsugineum HOM05D002666 ORTHO05D012460 4.1e-14 83.2 149 34.9
BcaC09g52201 Brassica carinata HOM05D002666 ORTHO05D012460 5.4e-14 82.8 172 30.8
A03p58500 Brassica napus HOM05D002666 ORTHO05D004769 5.4e-14 82.8 132 34.8
BolC1t00912H Brassica oleracea HOM05D002666 ORTHO05D012460 5.4e-14 82.8 172 30.8
BraA03t14911Z Brassica rapa HOM05D002666 ORTHO05D004769 5.4e-14 82.8 132 34.8
BcaC09g52206 Brassica carinata HOM05D002666 ORTHO05D004769 1.6e-13 81.3 128 36.7
BcaNung00436 Brassica carinata HOM05D002666 ORTHO05D004769 1.6e-13 81.3 144 34.0
C01p09860 Brassica napus HOM05D002666 ORTHO05D004769 1.6e-13 81.3 128 36.7
BolC1t00948H Brassica oleracea HOM05D002666 ORTHO05D004769 1.6e-13 81.3 128 36.7
Thhalv10027170m.g Eutrema salsugineum HOM05D002666 ORTHO05D012460 1.6e-13 81.3 146 30.8
AL5G23090 Arabidopsis lyrata HOM05D002666 ORTHO05D014834 2.7e-13 80.5 137 33.6
BcaC09g52199 Brassica carinata HOM05D002666 ORTHO05D012460 2.7e-13 80.5 130 36.9
BcaNung02900 Brassica carinata HOM05D002666 ORTHO05D004769 2.7e-13 80.5 144 34.7
C07p56520 Brassica napus HOM05D002666 ORTHO05D004769 2.7e-13 80.5 144 34.7
BolC7t46130H Brassica oleracea HOM05D002666 ORTHO05D004769 2.7e-13 80.5 144 34.7
AL7G23540 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 6.0e-13 79.3 138 34.8
AL8G41050 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.7e-12 77.8 129 34.9
BcaNung01346 Brassica carinata HOM05D002666 ORTHO05D004769 2.3e-12 77.4 136 33.1
C01p09810 Brassica napus HOM05D002666 ORTHO05D004769 2.3e-12 77.4 156 32.1
BraA01t00770Z Brassica rapa HOM05D002666 ORTHO05D004769 2.3e-12 77.4 133 36.1
BcaNung01344 Brassica carinata HOM05D002666 ORTHO05D004769 3.0e-12 77.0 136 34.6
C04p31880 Brassica napus HOM05D002666 ORTHO05D004769 3.0e-12 77.0 95 41.1
BcaC09g51769 Brassica carinata HOM05D002666 ORTHO05D004769 3.9e-12 76.6 139 33.8
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 3.9e-12 76.6 142 33.1
BolC8t47406H Brassica oleracea HOM05D002666 ORTHO05D014834 5.1e-12 76.3 168 33.3
A01p08200 Brassica napus HOM05D000574 ORTHO05D004834 8.6e-12 75.5 144 32.6
A01p08260 Brassica napus HOM05D002666 ORTHO05D004769 8.6e-12 75.5 139 32.4
BraA01t00766Z Brassica rapa HOM05D000574 ORTHO05D004834 8.6e-12 75.5 144 32.6
BraA01t00771Z Brassica rapa HOM05D002666 ORTHO05D004769 1.1e-11 75.1 139 33.1
AL446U10010 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.5e-11 74.7 125 35.2
BcaC09g51926 Brassica carinata HOM05D002666 ORTHO05D004769 1.5e-11 74.7 144 36.1
C08p06010 Brassica napus HOM05D002666 ORTHO05D014834 1.5e-11 74.7 168 32.7
BcaC07g37199 Brassica carinata HOM05D002666 ORTHO05D014834 1.9e-11 74.3 134 35.8
C01p09180 Brassica napus HOM05D002666 ORTHO05D012460 2.5e-11 73.9 139 32.4
BolC1t00909H Brassica oleracea HOM05D002666 ORTHO05D012460 2.5e-11 73.9 139 32.4
Thhalv10025678m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 2.5e-11 73.9 122 31.1
AL7G44900 Arabidopsis lyrata HOM05D002666 ORTHO05D012460 3.3e-11 73.6 143 32.2
A03p58520 Brassica napus HOM05D002666 ORTHO05D004769 3.3e-11 73.6 123 34.1
Thhalv10019458m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 3.3e-11 73.6 101 43.6
BcaC09g51774 Brassica carinata HOM05D000574 ORTHO05D004834 4.3e-11 73.2 142 30.3
A08p19510 Brassica napus HOM05D002666 ORTHO05D004769 4.3e-11 73.2 158 33.5
BraA08t33912Z Brassica rapa HOM05D002666 ORTHO05D004769 4.3e-11 73.2 158 33.5
Aa31sc613G10 Aethionema arabicum HOM05D002666 ORTHO05D004769 5.6e-11 72.8 101 40.6
A08p20570 Brassica napus HOM05D002666 ORTHO05D004769 5.6e-11 72.8 139 31.7
A08p21690 Brassica napus HOM05D002666 ORTHO05D004769 7.3e-11 72.4 136 35.3
BraA08t34013Z Brassica rapa HOM05D002666 ORTHO05D004769 7.3e-11 72.4 139 32.4
Aa31LG2G15570 Aethionema arabicum HOM05D002666 ORTHO05D004769 9.5e-11 72.0 102 41.2
BraA08t34120Z Brassica rapa HOM05D002666 ORTHO05D004769 9.5e-11 72.0 153 32.7
Carub.0006s2550 Capsella rubella HOM05D002666 ORTHO05D004769 1.2e-10 71.6 137 33.6
CARHR237650 Cardamine hirsuta HOM05D002666 ORTHO05D004769 1.2e-10 71.6 129 31.8
BcaC09g52202 Brassica carinata HOM05D002666 ORTHO05D004769 1.6e-10 71.2 139 31.7
C08p05230 Brassica napus HOM05D002666 ORTHO05D014834 1.6e-10 71.2 124 36.3
AL5G23050 Arabidopsis lyrata HOM05D002666 ORTHO05D014834 2.1e-10 70.9 126 34.1
BcaC09g51773 Brassica carinata HOM05D002666 ORTHO05D004769 2.8e-10 70.5 135 31.9
Aa31sc38G80 Aethionema arabicum HOM05D002666 ORTHO05D004769 4.7e-10 69.7 130 33.1
BolC1t00917H Brassica oleracea HOM05D002666 ORTHO05D004769 4.7e-10 69.7 132 34.8
Carub.0030s0003 Capsella rubella HOM05D002666 ORTHO05D004769 8.1e-10 68.9 91 40.7
Thhalv10027377m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 8.1e-10 68.9 134 31.3
BcaC09g52197 Brassica carinata HOM05D002666 ORTHO05D004769 1.1e-09 68.6 129 33.3
C01p09210 Brassica napus HOM05D002666 ORTHO05D012460 1.1e-09 68.6 203 27.6
AL7G23520 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.4e-09 68.2 137 32.8
BraA01t00767Z Brassica rapa HOM05D002666 ORTHO05D004769 1.4e-09 68.2 139 30.9
Carub.0005s1048 Capsella rubella HOM05D002666 ORTHO05D014834 1.4e-09 68.2 126 34.9
BraA02t07092Z Brassica rapa HOM05D002666 ORTHO05D107613 2.3e-09 67.4 41 75.6
CARHR235040 Cardamine hirsuta HOM05D002666 ORTHO05D004769 2.3e-09 67.4 68 52.9
C04p67940 Brassica napus HOM05D002666 ORTHO05D004769 3.1e-09 67.0 59 47.5
C01p09230 Brassica napus HOM05D002666 ORTHO05D004769 4.0e-09 66.6 139 27.3
Thhalv10000284m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 8.9e-09 65.5 58 51.7
C03p89040 Brassica napus HOM05D002666 ORTHO05D004769 1.2e-08 65.1 141 31.9
Aa31LG10G8180 Aethionema arabicum HOM05D002666 ORTHO05D004769 2.0e-08 64.3 129 31.0
BcaB04g17448 Brassica carinata HOM05D002666 ORTHO05D014834 2.6e-08 63.9 155 32.3
C01p09250 Brassica napus HOM05D002666 ORTHO05D004769 3.4e-08 63.5 189 31.2
Aa31sc38G60 Aethionema arabicum HOM05D002666 ORTHO05D004769 5.8e-08 62.8 129 31.8
AL2G40670 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.9e-07 60.5 48 58.3
BcaB04g17446 Brassica carinata HOM05D002666 ORTHO05D014834 3.7e-07 60.1 160 32.5
AL7G44690 Arabidopsis lyrata HOM05D002666 ORTHO05D079802 1.4e-06 58.2 120 31.7
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 3.2e-06 57.0 126 35.7


User provided reference genes

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