Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24931 Brassica carinata HOM05D002505 ORTHO05D006559 2.1e-35 151.8 72 100.0
BcaC08g46840 Brassica carinata HOM05D002505 ORTHO05D006559 2.7e-19 98.2 128 47.7
BcaB07g33312 Brassica carinata HOM05D002505 ORTHO05D006559 1.1e-12 76.3 38 94.7
BcaC08g43545 Brassica carinata HOM05D002505 ORTHO05D006559 1.9e-12 75.5 38 94.7
BolC6t36013H Brassica oleracea HOM05D001023 ORTHO05D006559 1.9e-12 75.5 38 94.7
BcaB02g10898 Brassica carinata HOM05D002505 ORTHO05D006559 3.2e-12 74.7 38 94.7
A06p00890 Brassica napus HOM05D001023 ORTHO05D006559 4.2e-12 74.3 38 92.1
BraA06t23318Z Brassica rapa HOM05D001023 ORTHO05D006559 4.2e-12 74.3 38 92.1
C06p09440 Brassica napus HOM05D001023 ORTHO05D006559 5.5e-12 73.9 38 92.1
Sp1g40180 Schrenkiella parvula HOM05D002505 ORTHO05D006559 6.1e-11 70.5 38 89.5
A05p18000 Brassica napus HOM05D002505 ORTHO05D006559 6.7e-10 67.0 38 81.6
BraA05t20694Z Brassica rapa HOM05D002505 ORTHO05D006559 6.7e-10 67.0 38 81.6
AT1G53645 Arabidopsis thaliana HOM05D002505 ORTHO05D006559 3.3e-09 64.7 38 73.7
AL1G62310 Arabidopsis lyrata HOM05D002505 ORTHO05D006559 4.3e-09 64.3 38 71.1
Carub.0001s4291 Capsella rubella HOM05D002505 ORTHO05D006559 4.3e-09 64.3 38 71.1
Thhalv10011382m.g Eutrema salsugineum HOM05D002505 ORTHO05D006559 5.7e-09 63.9 38 76.3
CARHR043910 Cardamine hirsuta HOM05D002505 ORTHO05D006559 9.7e-09 63.2 38 71.1
Aa31LG10G1650 Aethionema arabicum HOM05D002505 ORTHO05D006559 1.4e-07 59.3 38 71.1
BolC6t36693H Brassica oleracea HOM05D002505 ORTHO05D006559 7.7e-06 53.5 29 86.2


User provided reference genes

Program Settings