Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 4.9e-177 624.4 325 100.0
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 1.1e-64 251.1 215 73.0
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 5.3e-54 215.7 291 52.2
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 7.6e-53 211.8 220 59.5
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 1.0e-41 174.9 224 55.8
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 3.3e-40 169.9 191 62.3
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 7.4e-40 168.7 172 65.7
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-39 165.6 297 40.1
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 8.5e-36 155.2 175 61.7
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.4e-35 154.5 256 46.5
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 3.2e-35 153.3 292 38.0
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 7.2e-35 152.1 244 45.1
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 1.3e-33 147.9 225 53.8
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-33 147.5 280 40.4
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 1.5e-32 144.4 131 61.8
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.5e-32 144.4 190 48.4
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-32 143.7 244 43.4
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 2.4e-30 137.1 146 56.8
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 5.3e-30 136.0 210 44.8
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 2.6e-29 133.7 121 63.6
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 2.6e-29 133.7 121 63.6
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-28 130.2 244 38.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 6.5e-28 129.0 423 31.4
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 8.5e-28 128.6 244 41.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-27 127.9 244 43.9
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 5.5e-27 125.9 223 39.9
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-26 123.6 208 41.8
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-26 123.6 208 41.8
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 6.1e-26 122.5 116 61.2
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 6.1e-26 122.5 210 41.0
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-25 121.3 210 40.0
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-25 120.9 240 43.3
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 2.3e-25 120.6 235 37.9
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 3.9e-25 119.8 64 82.8
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-25 119.8 242 39.3
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 3.9e-25 119.8 242 39.3
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 5.1e-25 119.4 428 27.1
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-25 119.4 233 39.5
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-24 117.9 210 39.5
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-24 117.5 219 39.7
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 2.6e-24 117.1 65 80.0
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-24 116.7 244 41.4
BraA03t14602Z Brassica rapa HOM05D008277 ORTHO05D011446 3.3e-24 116.7 64 81.2
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 4.4e-24 116.3 210 39.5
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-24 116.3 204 42.2
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 4.4e-24 116.3 210 39.5
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 7.4e-24 115.5 220 39.5
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 7.4e-24 115.5 220 39.5
BraA07t28410Z Brassica rapa HOM05D008277 ORTHO05D011446 7.4e-24 115.5 90 63.3
A09p17520 Brassica napus HOM05D008277 ORTHO05D011446 1.3e-23 114.8 85 64.7
BraA08t32901Z Brassica rapa HOM05D008277 ORTHO05D011446 1.3e-23 114.8 90 63.3
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-23 114.4 210 43.3
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 2.2e-23 114.0 69 75.4
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-23 113.6 172 44.2
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 2.8e-23 113.6 128 56.2
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 2.8e-23 113.6 209 43.5
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 3.7e-23 113.2 82 65.9
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 3.7e-23 113.2 82 65.9
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 4.8e-23 112.8 69 75.4
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 4.8e-23 112.8 220 40.5
BraA10t42927Z Brassica rapa HOM05D008277 ORTHO05D011446 4.8e-23 112.8 65 78.5
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 8.2e-23 112.1 69 75.4
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 8.2e-23 112.1 244 40.6
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 1.8e-22 110.9 64 76.6
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 3.1e-22 110.2 64 78.1
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 3.1e-22 110.2 64 78.1
BraA03t15700Z Brassica rapa HOM05D008277 ORTHO05D011446 3.1e-22 110.2 64 78.1
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 3.1e-22 110.2 64 75.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 4.1e-22 109.8 209 38.3
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 5.3e-22 109.4 194 42.3
BraA09t38682Z Brassica rapa HOM05D008277 ORTHO05D011446 9.1e-22 108.6 68 73.5
BraA07t28379Z Brassica rapa HOM05D008277 ORTHO05D011446 1.2e-21 108.2 64 76.6
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 1.5e-21 107.8 64 75.0
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-21 107.5 209 37.3
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-21 106.7 139 48.9
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 4.5e-21 106.3 69 72.5
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 7.7e-21 105.5 134 48.5
BcaC01g02602 Brassica carinata HOM05D008277 ORTHO05D011446 1.0e-20 105.1 61 75.4
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-20 105.1 141 47.5
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-20 105.1 142 47.9
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.0e-20 105.1 209 39.7
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-20 104.8 140 47.1
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.7e-20 104.4 191 40.8
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-20 104.4 178 39.9
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 1.7e-20 104.4 64 75.0
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 5.0e-20 102.8 261 34.1
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 1.9e-19 100.9 220 40.0
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 3.2e-19 100.1 66 71.2
BraA05t21198Z Brassica rapa HOM05D008277 ORTHO05D011446 1.2e-18 98.2 64 70.3
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 1.6e-18 97.8 154 44.8
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 2.7e-18 97.1 191 39.3
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 6.1e-18 95.9 49 87.8
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 6.1e-18 95.9 134 46.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 7.9e-18 95.5 159 41.5
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.4e-17 94.7 90 60.0
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-17 94.0 145 46.2
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-17 94.0 108 49.1
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-17 93.2 132 43.2
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 3.9e-17 93.2 98 51.0
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 5.2e-17 92.8 181 39.8
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 6.7e-17 92.4 124 58.1
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 8.8e-17 92.0 141 46.8
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-16 91.7 180 38.9
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-16 91.3 107 49.5
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.5e-16 91.3 205 43.4
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.0e-16 90.9 108 49.1
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 2.0e-16 90.9 168 44.6
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 2.0e-16 90.9 108 49.1
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 5.7e-16 89.4 107 48.6
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 7.4e-16 89.0 179 38.5
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 7.4e-16 89.0 171 45.0
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 9.7e-16 88.6 100 51.0
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 9.7e-16 88.6 103 51.5
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-15 88.2 108 48.1
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-15 87.8 182 42.9
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-15 86.7 87 52.9
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 3.7e-15 86.7 107 47.7
C04p22330 Brassica napus HOM05D008277 ORTHO05D011446 4.8e-15 86.3 57 64.9
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 8.2e-15 85.5 209 37.8
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 8.2e-15 85.5 101 52.5
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 1.1e-14 85.1 114 48.2
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-14 84.7 172 44.2
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 4.1e-14 83.2 83 69.9
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 4.1e-14 83.2 100 47.0
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-13 81.6 84 52.4
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-13 80.9 141 51.1
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 3.5e-13 80.1 175 40.6
BcaB04g17829 Brassica carinata HOM05D008277 ORTHO05D011446 4.5e-13 79.7 37 97.3
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-12 78.6 138 41.3
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 1.7e-12 77.8 171 39.2
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 6.5e-12 75.9 184 39.7
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 8.5e-12 75.5 172 36.0
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 1.1e-11 75.1 148 44.6
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-11 75.1 129 41.1
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.5e-11 74.7 82 52.4
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 1.9e-11 74.3 97 46.4
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 2.5e-11 73.9 156 42.9
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 7.2e-11 72.4 80 51.2
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 7.2e-11 72.4 151 39.7
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-10 71.6 84 51.2
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-10 71.2 154 38.3
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 2.7e-10 70.5 136 38.2
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 3.6e-10 70.1 241 29.9
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.0e-09 68.6 184 32.6
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-09 68.2 78 47.4
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-09 67.0 168 36.9
BcaB03g16365 Brassica carinata HOM05D000706 ORTHO05D001633 1.2e-08 65.1 149 37.6
BcaC04g22308 Brassica carinata HOM05D008277 ORTHO05D011446 1.5e-08 64.7 38 76.3
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-08 63.5 119 40.3
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 5.7e-08 62.8 96 42.7
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-07 60.1 170 39.4
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 4.8e-07 59.7 167 32.9
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 1.8e-06 57.8 175 36.6
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 5.3e-06 56.2 94 42.6
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 9.1e-06 55.5 132 37.9


User provided reference genes

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