Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24902 Brassica carinata HOM05D010946 ORTHO05D012997 3.0e-107 392.1 241 100.0
C02p32490 Brassica napus HOM05D010946 ORTHO05D012997 1.7e-65 253.4 241 76.3
BolC2t09281H Brassica oleracea HOM05D010946 ORTHO05D012997 4.6e-63 245.4 248 75.0
BcaC03g15562 Brassica carinata HOM05D010946 ORTHO05D012997 3.0e-62 242.7 248 74.2
BraA02t07020Z Brassica rapa HOM05D010946 ORTHO05D012997 1.5e-61 240.4 250 74.4
A02p19870 Brassica napus HOM05D010946 ORTHO05D012997 4.3e-61 238.8 250 74.0
BcaC08g47008 Brassica carinata HOM05D010946 ORTHO05D012997 1.2e-50 204.1 265 57.4
Sp5g30500 Schrenkiella parvula HOM05D010946 ORTHO05D012997 2.1e-44 183.3 251 54.6
A07p40920 Brassica napus HOM05D010946 ORTHO05D012997 1.1e-43 181.0 255 51.4
BraA07t31632Z Brassica rapa HOM05D010946 ORTHO05D012997 6.9e-43 178.3 250 51.2
BcaC08g47360 Brassica carinata HOM05D010946 ORTHO05D012997 2.6e-42 176.4 260 55.8
C06p49350 Brassica napus HOM05D010946 ORTHO05D012997 2.6e-42 176.4 260 55.8
BolC6t39970H Brassica oleracea HOM05D010946 ORTHO05D012997 2.6e-42 176.4 260 55.8
Thhalv10019434m.g Eutrema salsugineum HOM05D010946 ORTHO05D012997 1.8e-38 163.7 229 48.0
AL2G35290 Arabidopsis lyrata HOM05D010946 ORTHO05D012997 4.8e-28 129.0 284 45.4
AT1G75360 Arabidopsis thaliana HOM05D010946 ORTHO05D012997 2.2e-25 120.2 258 46.5
Carub.0002s2220 Capsella rubella HOM05D010946 ORTHO05D012997 1.6e-23 114.0 255 40.4
CARHR068710 Cardamine hirsuta HOM05D010946 ORTHO05D012997 5.7e-21 105.5 227 47.6
THA.LOC104813819 Tarenaya hassleriana HOM05D010946 ORTHO05D012997 7.5e-13 78.6 260 30.8
AL1G32340 Arabidopsis lyrata HOM05D011627 ORTHO05D013737 8.0e-07 58.5 246 27.6


User provided reference genes

Program Settings