Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24834 Brassica carinata HOM05D000313 ORTHO05D031883 5.9e-36 153.7 78 100.0
C01p42210 Brassica napus HOM05D000313 ORTHO05D031883 2.4e-13 78.6 80 58.8
C06p34380 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-11 70.9 77 53.2
BcaC09g51568 Brassica carinata HOM05D000313 ORTHO05D031883 6.6e-11 70.5 77 55.8
BraA09t36871Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-10 69.7 80 52.5
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-10 68.2 94 44.7
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-10 68.2 94 44.7
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 67.8 94 44.7
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 65.5 61 54.1
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-09 63.5 94 41.5
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.2e-07 59.7 66 51.5
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-07 58.5 94 37.2
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 57.4 93 39.8
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-07 57.0 94 39.4
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 56.6 94 39.4
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-07 56.6 94 39.4
BolC9t55032H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 55.8 76 42.1
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 54.7 94 35.1
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 54.7 94 35.1
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-06 53.5 76 40.8


User provided reference genes

Program Settings