Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24764 Brassica carinata HOM05D005576 ORTHO05D007010 3.5e-83 311.6 163 100.0
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 2.0e-46 189.5 122 85.2
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 1.1e-44 183.7 122 81.1
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 9.4e-44 180.6 122 80.3
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 1.2e-43 180.3 122 80.3
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 3.6e-43 178.7 119 81.5
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 1.8e-42 176.4 122 77.9
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 1.8e-42 176.4 122 79.5
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 2.3e-42 176.0 122 77.9
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 3.0e-42 175.6 122 77.9
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 4.0e-42 175.3 122 77.0
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.3e-40 170.2 122 75.4
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 9.1e-39 164.1 123 74.0
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 3.5e-38 162.2 122 70.5
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.0e-37 160.6 123 73.2
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 4.7e-35 151.8 122 67.2
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 6.8e-34 147.9 138 61.6
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 6.8e-34 147.9 122 66.4
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 6.8e-34 147.9 122 67.2
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 6.8e-34 147.9 122 67.2
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 8.8e-34 147.5 119 67.2
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 8.8e-34 147.5 122 65.6
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 8.8e-34 147.5 122 66.4
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 1.2e-33 147.1 122 65.6
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 1.5e-33 146.7 116 69.0
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 2.0e-33 146.4 116 69.8
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 2.0e-33 146.4 122 66.4
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 2.0e-33 146.4 122 67.2
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 2.6e-33 146.0 122 65.6
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 3.4e-33 145.6 122 65.6
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 4.4e-33 145.2 122 64.8
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 4.4e-33 145.2 119 65.5
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 4.4e-33 145.2 122 66.4
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 4.4e-33 145.2 122 66.4
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 4.4e-33 145.2 119 65.5
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 5.7e-33 144.8 122 63.9
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 5.7e-33 144.8 122 66.4
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 5.7e-33 144.8 122 63.9
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 5.7e-33 144.8 122 63.9
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 7.5e-33 144.4 116 68.1
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 9.8e-33 144.1 122 63.9
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 9.8e-33 144.1 122 63.9
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 9.8e-33 144.1 122 63.9
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 1.3e-32 143.7 122 66.4
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 1.7e-32 143.3 119 64.7
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 1.7e-32 143.3 122 64.8
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 2.2e-32 142.9 116 63.8
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 2.2e-32 142.9 122 63.1
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 2.2e-32 142.9 122 63.9
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 2.8e-32 142.5 122 63.1
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 2.8e-32 142.5 122 63.1
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 3.7e-32 142.1 122 63.1
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 3.7e-32 142.1 122 63.1
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 6.3e-32 141.4 122 62.3
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 6.3e-32 141.4 122 63.1
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 8.3e-32 141.0 122 62.3
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 8.3e-32 141.0 122 63.1
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 1.1e-31 140.6 122 63.1
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 1.1e-31 140.6 122 63.1
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 1.4e-31 140.2 122 63.9
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 3.1e-31 139.0 122 63.9
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 3.1e-31 139.0 122 61.5
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 3.1e-31 139.0 122 63.1
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 4.1e-31 138.7 116 66.4
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.0e-31 137.9 119 63.9
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.0e-31 137.9 119 63.9
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.0e-31 137.9 119 63.9
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 9.1e-31 137.5 122 61.5
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 9.1e-31 137.5 122 61.5
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 9.1e-31 137.5 122 62.3
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 9.1e-31 137.5 122 62.3
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 9.1e-31 137.5 122 62.3
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 1.2e-30 137.1 122 60.7
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 1.2e-30 137.1 116 67.2
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 1.2e-30 137.1 95 77.9
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 1.6e-30 136.7 122 61.5
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 1.6e-30 136.7 122 61.5
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 2.7e-30 136.0 116 64.7
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 3.5e-30 135.6 116 64.7
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 4.5e-30 135.2 122 62.3
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 5.9e-30 134.8 116 64.7
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 1.0e-29 134.0 122 59.8
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 1.0e-29 134.0 122 59.0
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 1.0e-29 134.0 122 59.8
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 1.3e-29 133.7 122 59.8
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 2.3e-29 132.9 122 61.5
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 2.3e-29 132.9 122 61.5
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 2.9e-29 132.5 122 59.8
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 2.9e-29 132.5 122 59.0
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 2.9e-29 132.5 122 60.7
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 3.8e-29 132.1 122 61.5
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 3.8e-29 132.1 122 60.7
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 3.8e-29 132.1 122 61.5
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 5.0e-29 131.7 147 53.7
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 6.6e-29 131.3 116 66.4
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 6.6e-29 131.3 119 61.3
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 6.6e-29 131.3 122 59.8
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.1e-28 130.6 116 64.7
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 1.9e-28 129.8 122 59.0
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 3.3e-28 129.0 122 57.4
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 3.3e-28 129.0 122 57.4
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 2.8e-27 125.9 116 64.7
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 2.8e-27 125.9 122 59.8
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 3.6e-27 125.6 116 64.7
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 6.1e-27 124.8 122 55.7
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 6.1e-27 124.8 119 56.3
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 6.3e-24 114.8 146 51.4
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 5.4e-23 111.7 121 51.2
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 4.5e-22 108.6 116 49.1
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 1.7e-21 106.7 122 51.6
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.7e-21 106.7 116 48.3
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 2.3e-21 106.3 122 51.6
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 8.6e-21 104.4 116 47.4
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 2.1e-19 99.8 119 47.1
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 3.6e-19 99.0 120 50.0
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 4.7e-19 98.6 115 51.3
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 4.0e-18 95.5 122 42.6
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 3.4e-17 92.4 123 46.3
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 1.4e-15 87.0 90 55.6
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.2e-14 84.0 60 65.0
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 1.2e-14 84.0 57 71.9
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.5e-12 76.3 64 59.4
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 2.1e-11 73.2 122 39.3
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 2.3e-10 69.7 80 45.0


User provided reference genes

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