Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24747 Brassica carinata HOM05D008786 ORTHO05D011065 1.0e-45 186.4 97 100.0
BolC2t09030H Brassica oleracea HOM05D008786 ORTHO05D011065 1.0e-29 133.3 76 93.4
BcaB03g14979 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-29 132.9 102 72.5
BcaC03g15370 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-29 132.9 76 92.1
C02p29830 Brassica napus HOM05D008786 ORTHO05D011065 3.0e-29 131.7 79 88.6
Sp5g27390 Schrenkiella parvula HOM05D008786 ORTHO05D011065 1.1e-28 129.8 102 73.5
BraA02t06842Z Brassica rapa HOM05D008786 ORTHO05D011065 7.4e-28 127.1 76 88.2
CARHR065230 Cardamine hirsuta HOM05D008786 ORTHO05D011065 1.3e-27 126.3 97 71.1
BraA07t31409Z Brassica rapa HOM05D008786 ORTHO05D011065 2.8e-27 125.2 102 72.5
A07p38490 Brassica napus HOM05D008786 ORTHO05D011065 6.2e-27 124.0 102 71.6
A07p30280 Brassica napus HOM05D008786 ORTHO05D042067 7.6e-25 117.1 102 66.7
Carub.0002s1917 Capsella rubella HOM05D008786 ORTHO05D011065 7.6e-25 117.1 92 71.7
BcaB03g15660 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-24 116.3 102 68.6
BcaC08g46687 Brassica carinata HOM05D008786 ORTHO05D011065 2.2e-24 115.5 97 71.1
C06p46670 Brassica napus HOM05D008786 ORTHO05D011065 2.2e-24 115.5 97 71.1
BolC6t39712H Brassica oleracea HOM05D008786 ORTHO05D011065 2.2e-24 115.5 97 71.1
C06p35030 Brassica napus HOM05D008786 ORTHO05D011065 1.4e-23 112.8 102 66.7
BolC6t38602H Brassica oleracea HOM05D008786 ORTHO05D011065 1.4e-23 112.8 102 66.7
Thhalv10019794m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 6.0e-22 107.5 80 77.5
Thhalv10009909m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 2.8e-19 98.6 91 64.8
AL1G29540 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 1.4e-18 96.3 90 61.1
BcaC08g45715 Brassica carinata HOM05D008786 ORTHO05D011065 1.4e-18 96.3 81 69.1
AT1G17285 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 2.0e-17 92.4 91 58.2
AL8G24690 Arabidopsis lyrata HOM05D011936 ORTHO05D014852 1.4e-15 86.3 97 55.7
Aa31LG4G2690 Aethionema arabicum HOM05D008786 ORTHO05D011065 1.9e-15 85.9 106 58.5
BcaC07g41429 Brassica carinata HOM05D008786 ORTHO05D011065 3.2e-15 85.1 86 59.3
C08p43960 Brassica napus HOM05D008786 ORTHO05D011065 3.2e-15 85.1 86 59.3
BcaC07g41411 Brassica carinata HOM05D008786 ORTHO05D011065 4.2e-15 84.7 91 58.2
AT5G50443 Arabidopsis thaliana HOM05D011936 ORTHO05D014852 5.5e-15 84.3 97 53.6
AL1G29560 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 7.1e-15 84.0 65 66.2
CARHR017880 Cardamine hirsuta HOM05D008786 ORTHO05D011065 7.1e-15 84.0 90 55.6
Sp1g15420 Schrenkiella parvula HOM05D008786 ORTHO05D011065 7.1e-15 84.0 91 54.9
A09p60480 Brassica napus HOM05D008786 ORTHO05D011065 2.7e-14 82.0 87 58.6
A02p17950 Brassica napus HOM05D008786 ORTHO05D011065 6.0e-14 80.9 47 89.4
Carub.0001s1705 Capsella rubella HOM05D008786 ORTHO05D011065 1.8e-13 79.3 66 65.2
Carub.0008s1056 Capsella rubella HOM05D011936 ORTHO05D014852 2.3e-13 79.0 97 54.6
THA.LOC104812274 Tarenaya hassleriana HOM05D008786 ORTHO05D011065 8.7e-13 77.0 101 48.5
A06p13240 Brassica napus HOM05D008786 ORTHO05D011065 1.5e-12 76.3 100 52.0
CARHR257850 Cardamine hirsuta HOM05D011936 ORTHO05D014852 1.9e-12 75.9 93 51.6
Aa31LG7G2110 Aethionema arabicum HOM05D008786 ORTHO05D011065 1.3e-11 73.2 99 49.5
AT1G17300 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 1.3e-11 73.2 65 61.5
C05p15680 Brassica napus HOM05D008786 ORTHO05D011065 2.2e-11 72.4 97 52.6
BraA06t24477Z Brassica rapa HOM05D008786 ORTHO05D011065 2.8e-11 72.0 101 52.5
BolC8t51945H Brassica oleracea HOM05D001342 ORTHO05D001286 1.4e-10 69.7 68 61.8
BraA09t41419Z Brassica rapa HOM05D001342 ORTHO05D001286 3.1e-10 68.6 69 62.3
BraA07t30665Z Brassica rapa HOM05D008786 ORTHO05D042067 9.0e-10 67.0 64 65.6
Thhalv10015176m.g Eutrema salsugineum HOM05D011936 ORTHO05D014852 5.9e-09 64.3 97 49.5
Sp6g12625 Schrenkiella parvula HOM05D011936 ORTHO05D014852 1.3e-08 63.2 98 53.1
SpUn0015_0010 Schrenkiella parvula HOM05D011936 ORTHO05D014852 1.3e-08 63.2 98 53.1
C02p20830 Brassica napus HOM05D011936 ORTHO05D014852 2.2e-08 62.4 97 48.5
BolC2t08223H Brassica oleracea HOM05D011936 ORTHO05D014852 2.2e-08 62.4 97 48.5
A02p12770 Brassica napus HOM05D011936 ORTHO05D014852 2.9e-08 62.0 97 48.5
BraA02t06334Z Brassica rapa HOM05D011936 ORTHO05D014852 2.9e-08 62.0 97 48.5
BcaC05g25651 Brassica carinata HOM05D008786 ORTHO05D011065 3.8e-08 61.6 71 53.5
BolC5t30275H Brassica oleracea HOM05D001342 ORTHO05D001286 3.8e-08 61.6 71 53.5
BcaB07g34035 Brassica carinata HOM05D008786 ORTHO05D011065 3.2e-07 58.5 92 47.8


User provided reference genes

Program Settings