Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24745 Brassica carinata HOM05D011782 ORTHO05D000628 7.6e-86 320.5 162 100.0
BcaB08g36663 Brassica carinata HOM05D000568 ORTHO05D000628 4.5e-14 82.0 119 46.2
BcaC03g13607 Brassica carinata HOM05D000568 ORTHO05D000628 5.9e-14 81.6 122 44.3
A02p04980 Brassica napus HOM05D000568 ORTHO05D000628 7.7e-14 81.3 123 44.7
C02p10010 Brassica napus HOM05D000568 ORTHO05D000628 1.3e-13 80.5 122 44.3
BolC2t06903H Brassica oleracea HOM05D000568 ORTHO05D000628 1.3e-13 80.5 122 44.3
AL6G29820 Arabidopsis lyrata HOM05D000568 ORTHO05D000628 2.2e-13 79.7 123 43.1
BraA02t05457Z Brassica rapa HOM05D000568 ORTHO05D000628 8.5e-13 77.8 123 44.7
Carub.0006s1682 Capsella rubella HOM05D000568 ORTHO05D000628 1.9e-12 76.6 124 41.9
BcaB05g23336 Brassica carinata HOM05D000568 ORTHO05D000628 4.2e-12 75.5 119 42.9
Aa31LG5G16930 Aethionema arabicum HOM05D000568 ORTHO05D000628 5.5e-12 75.1 121 44.6
CARHR194470 Cardamine hirsuta HOM05D000568 ORTHO05D000628 8.0e-11 71.2 123 41.5
Sp6g25780 Schrenkiella parvula HOM05D000568 ORTHO05D000628 8.0e-11 71.2 103 43.7
AT5G18550 Arabidopsis thaliana HOM05D000568 ORTHO05D000628 6.8e-10 68.2 110 44.5
Thhalv10013460m.g Eutrema salsugineum HOM05D000568 ORTHO05D000628 6.8e-10 68.2 103 42.7
THA.LOC104827112 Tarenaya hassleriana HOM05D000568 ORTHO05D000628 1.2e-09 67.4 125 43.2
Thhalv10020686m.g Eutrema salsugineum HOM05D000568 ORTHO05D000628 3.4e-09 65.9 117 41.0
THA.LOC104818850 Tarenaya hassleriana HOM05D000568 ORTHO05D000628 3.4e-09 65.9 121 43.0
CARHR080940 Cardamine hirsuta HOM05D000568 ORTHO05D000628 4.4e-09 65.5 117 40.2
Sp3g05330 Schrenkiella parvula HOM05D000568 ORTHO05D000628 4.4e-09 65.5 117 41.0
A03p34660 Brassica napus HOM05D000568 ORTHO05D000628 7.5e-09 64.7 117 40.2
BcaC05g30029 Brassica carinata HOM05D000568 ORTHO05D000628 9.8e-09 64.3 117 41.0
A05p41620 Brassica napus HOM05D000568 ORTHO05D000628 9.8e-09 64.3 117 41.0
BraA03t12643Z Brassica rapa HOM05D000568 ORTHO05D000628 9.8e-09 64.3 117 40.2
AL3G17360 Arabidopsis lyrata HOM05D000568 ORTHO05D000628 1.3e-08 63.9 118 39.8
BcaC05g29815 Brassica carinata HOM05D000568 ORTHO05D000628 1.3e-08 63.9 118 40.7
C05p60830 Brassica napus HOM05D000568 ORTHO05D000628 1.3e-08 63.9 118 40.7
BolC5t34740H Brassica oleracea HOM05D000568 ORTHO05D000628 1.3e-08 63.9 118 40.7
FAN17G0266 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.7e-08 63.5 130 36.2
BcaNung02031 Brassica carinata HOM05D011782 ORTHO05D014931 2.2e-08 63.2 50 74.0
BolC7t44859H Brassica oleracea HOM05D011782 ORTHO05D014931 2.2e-08 63.2 50 74.0
FAN12G0371 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.8e-08 62.8 124 37.1
BcaB03g14674 Brassica carinata HOM05D000568 ORTHO05D000628 3.7e-08 62.4 110 40.9
C03p42130 Brassica napus HOM05D000568 ORTHO05D000628 3.7e-08 62.4 110 40.9
BolC3t16493H Brassica oleracea HOM05D000568 ORTHO05D000628 3.7e-08 62.4 110 40.9
BraA05t22881Z Brassica rapa HOM05D000568 ORTHO05D000628 3.7e-08 62.4 124 37.9
AT3G06410 Arabidopsis thaliana HOM05D000568 ORTHO05D000628 4.9e-08 62.0 111 38.7
QL06p008078 Quercus lobata HOM05D000568 ORTHO05D000628 4.9e-08 62.0 121 38.0
BcaC07g37504 Brassica carinata HOM05D011782 ORTHO05D014931 6.3e-08 61.6 51 68.6
Prupe.1G139500 Prunus persica HOM05D000568 ORTHO05D000628 6.3e-08 61.6 120 36.7
TAR636G3257 Trochodendron aralioides HOM05D000568 ORTHO05D000628 6.3e-08 61.6 116 37.9
BcaB04g21335 Brassica carinata HOM05D000568 ORTHO05D000628 8.3e-08 61.2 117 39.3
Carub.0003s0585 Capsella rubella HOM05D000568 ORTHO05D000628 8.3e-08 61.2 111 36.9
FAN07G1518 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.1e-07 60.8 145 34.5
RcHm_v2.0_Chr4g0421561 Rosa chinensis HOM05D000568 ORTHO05D000628 1.1e-07 60.8 121 37.2
Lalb_Chr12g0196511 Lupinus albus HOM05D000568 ORTHO05D000628 3.1e-07 59.3 122 39.3
MD16G1172700 Malus domestica HOM05D000568 ORTHO05D000628 3.1e-07 59.3 120 38.3
C07p43310 Brassica napus HOM05D011782 ORTHO05D014931 4.1e-07 58.9 51 72.5
Lalb_Chr15g0086941 Lupinus albus HOM05D000568 ORTHO05D000628 4.1e-07 58.9 126 36.5
FvH4_4g17640 Fragaria vesca HOM05D000568 ORTHO05D000628 5.4e-07 58.5 121 35.5
FAN12G0132 Fragaria x ananassa HOM05D000568 ORTHO05D000628 5.4e-07 58.5 121 35.5
FAN22G0784 Fragaria x ananassa HOM05D000568 ORTHO05D000628 5.4e-07 58.5 121 35.5
Nn3g21373 Nelumbo nucifera HOM05D000568 ORTHO05D000628 5.4e-07 58.5 124 36.3
Psat4g028360 Pisum sativum HOM05D000568 ORTHO05D000628 5.4e-07 58.5 120 36.7
Cfa015365 Carpinus fangiana HOM05D000568 ORTHO05D000628 7.0e-07 58.2 125 36.8
TWI14G0800 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 7.0e-07 58.2 115 39.1
TWI73G0244 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 7.0e-07 58.2 120 35.8
Aa31LG11G11070 Aethionema arabicum HOM05D000568 ORTHO05D000628 9.2e-07 57.8 110 37.3
CiPaw.01G150900 Carya illinoinensis HOM05D000568 ORTHO05D000628 9.2e-07 57.8 121 37.2
Hma1.2p1_0698F.1_g205386 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 9.2e-07 57.8 121 37.2
CANSAT78G0628 Cannabis sativa HOM05D000568 ORTHO05D000628 1.2e-06 57.4 115 40.0
Medtr4g119280 Medicago truncatula HOM05D000568 ORTHO05D000628 1.2e-06 57.4 120 36.7
Dinv44403 Davidia involucrata HOM05D000568 ORTHO05D000628 1.6e-06 57.0 121 36.4
Lj4g0003109 Lotus japonicus HOM05D000568 ORTHO05D000628 1.6e-06 57.0 161 33.5
Sed0013782 Sechium edule HOM05D000568 ORTHO05D000628 1.6e-06 57.0 120 37.5
TPR.G14619 Trifolium pratense HOM05D000568 ORTHO05D000628 1.6e-06 57.0 120 36.7
Ah.13g066600 Amaranthus hybridus HOM05D000568 ORTHO05D000628 2.0e-06 56.6 127 34.6
Ca_21535_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 2.0e-06 56.6 139 34.5
COL.COLO4_13903 Corchorus olitorius HOM05D000568 ORTHO05D000628 2.0e-06 56.6 121 37.2
Sed0002919 Sechium edule HOM05D000568 ORTHO05D000628 2.0e-06 56.6 120 37.5
Cc03_g02100 Coffea canephora HOM05D000568 ORTHO05D000628 2.7e-06 56.2 121 36.4
Haze_01241 Corylus avellana HOM05D000568 ORTHO05D000628 3.5e-06 55.8 125 36.0
Manes.15G014500 Manihot esculenta HOM05D000568 ORTHO05D000628 3.5e-06 55.8 127 35.4
Phvul.006G163300 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 3.5e-06 55.8 123 37.4
arahy.Tifrunner.gnm1.ann1.3LDH3N Arachis hypogaea HOM05D000568 ORTHO05D000628 4.5e-06 55.5 122 38.5
BraA01t04440Z Brassica rapa HOM05D000568 ORTHO05D000628 4.5e-06 55.5 121 38.0
CSS0016477 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 4.5e-06 55.5 121 36.4
ClCG05G005940 Citrullus lanatus HOM05D000568 ORTHO05D000628 4.5e-06 55.5 120 37.5
Ciclev10004882m.g Citrus clementina HOM05D000568 ORTHO05D000628 4.5e-06 55.5 127 37.0
MELO3C006627.2 Cucumis melo HOM05D000568 ORTHO05D000628 4.5e-06 55.5 120 37.5
CsaV3_3G014330 Cucumis sativus L. HOM05D000568 ORTHO05D000628 4.5e-06 55.5 120 37.5
Glyma.17G024400 Glycine max HOM05D000568 ORTHO05D000628 4.5e-06 55.5 126 35.7
Lalb_Chr20g0118041 Lupinus albus HOM05D000568 ORTHO05D000628 4.5e-06 55.5 127 36.2
GSVIVG01017774001 Vitis vinifera HOM05D000568 ORTHO05D000628 4.5e-06 55.5 125 36.8
Atru.chr4.2791 Acer truncatum HOM05D000568 ORTHO05D000628 5.9e-06 55.1 121 35.5
Actinidia01946 Actinidia chinensis HOM05D000568 ORTHO05D000628 5.9e-06 55.1 120 34.2
BNapus_Darmor_BZH_scaffold_118p00150 Brassica napus HOM05D000568 ORTHO05D000628 5.9e-06 55.1 119 37.0
ECA246G2417 Erigeron canadensis HOM05D000568 ORTHO05D000628 5.9e-06 55.1 170 30.0
Eucgr.H01196 Eucalyptus grandis HOM05D000568 ORTHO05D000628 5.9e-06 55.1 117 38.5
Sc19g0005030 Simmondsia chinensis HOM05D000568 ORTHO05D000628 5.9e-06 55.1 120 34.2
TWI59G1193 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 5.9e-06 55.1 105 38.1
TAR365G0513 Trochodendron aralioides HOM05D000568 ORTHO05D000628 5.9e-06 55.1 121 34.7
A10p21010 Brassica napus HOM05D000568 ORTHO05D000628 7.7e-06 54.7 117 37.6
CSS0001228 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 7.7e-06 54.7 115 35.7
CSS0049456 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 7.7e-06 54.7 115 35.7
Migut.N00107 Erythranthe guttata HOM05D000568 ORTHO05D000628 7.7e-06 54.7 116 35.3
Phvul.003G102600 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 7.7e-06 54.7 122 36.9
SGA_v2.0_scaffold599G53122 Striga asiatica HOM05D000568 ORTHO05D000628 7.7e-06 54.7 116 36.2
VMungo1215G1779 Vigna mungo HOM05D000568 ORTHO05D000628 7.7e-06 54.7 122 36.9


User provided reference genes

Program Settings