Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-123 445.7 220 100.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-121 439.1 220 99.5
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-99 365.9 223 83.0
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.1e-99 365.9 226 81.9
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 2.1e-99 365.9 223 83.0
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.1e-99 365.9 226 81.9
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 8.7e-93 344.0 210 81.9
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-92 341.7 224 76.3
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 7.4e-92 340.9 228 77.6
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 6.2e-91 337.8 210 81.0
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 6.2e-91 337.8 210 81.0
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-81 306.2 213 73.2
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 2.0e-81 306.2 213 73.2
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 4.6e-78 295.0 187 79.1
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 3.0e-61 239.2 224 57.1
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 3.4e-57 225.7 223 53.4
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 5.5e-55 218.4 219 53.4
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 5.5e-55 218.4 223 53.4
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 2.1e-54 216.5 219 53.4
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 4.7e-54 215.3 219 53.0
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-54 215.3 219 53.0
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-52 209.9 220 53.2
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 5.7e-52 208.4 220 51.8
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 5.7e-52 208.4 219 51.6
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 5.7e-52 208.4 220 51.8
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 9.7e-52 207.6 223 52.0
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-51 204.5 223 51.6
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-51 204.5 223 51.6
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-50 204.1 220 51.4
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 7.0e-50 201.4 210 50.0
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 2.6e-49 199.5 221 50.2
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.2e-46 190.7 219 50.2
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.8e-45 186.8 224 50.4
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 5.2e-45 185.3 198 49.5
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 9.7e-44 181.0 217 49.3
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 9.7e-44 181.0 217 49.3
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 3.7e-43 179.1 217 49.3
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-43 177.9 218 49.1
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.8e-42 176.8 226 47.8
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-42 176.4 217 48.8
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-41 174.1 218 48.2
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 3.2e-39 166.0 221 47.1
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 3.6e-38 162.5 229 47.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 8.0e-38 161.4 218 47.7
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-37 161.0 219 47.0
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-37 161.0 219 47.0
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-37 161.0 219 47.0
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-37 160.2 203 43.3
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 3.0e-37 159.5 218 47.2
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-36 157.1 225 43.1
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 7.5e-36 154.8 206 43.7
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 2.2e-35 153.3 160 52.5
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-35 152.9 222 43.2
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 2.8e-35 152.9 222 43.2
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 3.7e-35 152.5 223 43.5
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 6.3e-35 151.8 206 46.1
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 6.3e-35 151.8 206 46.1
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 6.3e-35 151.8 206 46.1
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 2.4e-34 149.8 224 42.0
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 7.0e-34 148.3 206 45.6
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 7.0e-34 148.3 206 45.6
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 6.5e-32 141.7 215 42.3
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 4.4e-28 129.0 223 42.6
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 4.4e-28 129.0 223 42.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-22 109.0 224 38.4
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 4.0e-21 105.9 224 37.9
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 6.8e-21 105.1 225 37.8
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 8.9e-21 104.8 224 37.5
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-20 104.0 170 40.0
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.6e-20 103.2 223 35.4
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-20 103.2 222 34.2
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 2.6e-20 103.2 222 34.2
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.4e-20 102.4 121 50.4
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 5.7e-20 102.1 232 35.8
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 9.8e-20 101.3 121 50.4
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-19 100.9 204 37.3
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-19 100.5 230 37.0
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-19 100.1 226 32.7
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-19 100.1 226 32.7
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 6.4e-19 98.6 226 32.3
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.4e-18 97.4 224 34.8
AL2G33090 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 5.4e-18 95.5 226 37.2
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 7.0e-18 95.1 115 45.2
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 7.0e-18 95.1 115 45.2
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 7.0e-18 95.1 115 45.2
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 5.9e-17 92.0 225 34.7
Thhalv10019129m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 1.7e-16 90.5 226 36.7
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.7e-16 90.5 229 34.5
AT1G73325 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 1.5e-15 87.4 226 35.4
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-15 87.0 227 32.6
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 4.3e-15 85.9 163 36.2
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 7.3e-15 85.1 203 32.0
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 7.3e-15 85.1 203 32.0
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 7.3e-15 85.1 203 32.0
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 2.8e-14 83.2 230 32.6
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 6.2e-14 82.0 92 52.2
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 6.2e-14 82.0 92 52.2
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.0e-13 81.3 218 33.0
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.8e-13 80.5 226 31.9
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.8e-13 80.5 222 33.3
Sp5g28260 Schrenkiella parvula HOM05D000535 ORTHO05D009010 4.0e-13 79.3 228 33.8
CARHR066380 Cardamine hirsuta HOM05D000535 ORTHO05D000427 6.8e-13 78.6 229 34.9
THA.LOC104812189 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 4.4e-12 75.9 199 33.2
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-12 75.5 78 50.0
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 5.8e-12 75.5 122 38.5
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 7.5e-12 75.1 211 32.2
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 9.8e-12 74.7 80 47.5
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 2.9e-11 73.2 203 32.5
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 3.7e-11 72.8 73 49.3
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 3.7e-11 72.8 73 49.3
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 6.4e-11 72.0 220 30.5
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 3.3e-07 59.7 220 29.1
Nitab4.5_0000477g0210 Nicotiana tabacum HOM05D000535 ORTHO05D000427 4.7e-06 55.8 133 30.1


User provided reference genes

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