Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24733 Brassica carinata HOM05D009138 ORTHO05D011294 8.6e-59 230.3 135 100.0
A02p17840 Brassica napus HOM05D009138 ORTHO05D011294 2.6e-47 192.2 137 81.8
BraA02t06833Z Brassica rapa HOM05D009138 ORTHO05D011294 2.6e-47 192.2 137 81.8
BolC2t09015H Brassica oleracea HOM05D009138 ORTHO05D011294 5.8e-47 191.0 135 83.0
BcaC08g46671 Brassica carinata HOM05D009138 ORTHO05D011294 7.6e-39 164.1 142 78.9
C06p46400 Brassica napus HOM05D009138 ORTHO05D011294 7.6e-39 164.1 142 78.9
Sp5g27330 Schrenkiella parvula HOM05D009138 ORTHO05D011294 1.4e-37 159.8 139 79.1
AT1G72240 Arabidopsis thaliana HOM05D009138 ORTHO05D011294 7.1e-37 157.5 137 67.9
BcaC03g15358 Brassica carinata HOM05D009138 ORTHO05D011294 6.0e-36 154.5 149 65.1
BcaB03g14968 Brassica carinata HOM05D009138 ORTHO05D011294 3.0e-35 152.1 142 73.2
AL2G31910 Arabidopsis lyrata HOM05D009138 ORTHO05D011294 7.3e-34 147.5 123 77.2
Thhalv10019488m.g Eutrema salsugineum HOM05D009138 ORTHO05D011294 1.2e-33 146.7 137 74.5
C02p29610 Brassica napus HOM05D009138 ORTHO05D011294 1.6e-33 146.4 138 66.7
CARHR065100 Cardamine hirsuta HOM05D009138 ORTHO05D011294 5.2e-32 141.4 121 74.4
Carub.0002s1905 Capsella rubella HOM05D009138 ORTHO05D011294 5.8e-31 137.9 140 62.9
A07p38370 Brassica napus HOM05D009138 ORTHO05D011294 8.4e-30 134.0 142 69.0
BraA07t31398Z Brassica rapa HOM05D009138 ORTHO05D011294 8.4e-30 134.0 142 69.0
BolC6t39688H Brassica oleracea HOM05D009138 ORTHO05D011294 1.2e-28 130.2 140 70.0
C02p29650 Brassica napus HOM05D009138 ORTHO05D011294 2.4e-24 115.9 99 69.7
Sp1g19950 Schrenkiella parvula HOM05D009138 ORTHO05D011294 1.5e-23 113.2 148 51.4
A09p42310 Brassica napus HOM05D009138 ORTHO05D011294 4.9e-22 108.2 151 49.7
BraA09t39712Z Brassica rapa HOM05D009138 ORTHO05D011294 4.9e-22 108.2 151 49.7
AT1G22470 Arabidopsis thaliana HOM05D009138 ORTHO05D011294 5.1e-19 98.2 148 52.7
Thhalv10009293m.g Eutrema salsugineum HOM05D009138 ORTHO05D011294 5.6e-18 94.7 151 45.7
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 2.8e-17 92.4 116 56.0
C05p21570 Brassica napus HOM05D009138 ORTHO05D011294 3.6e-17 92.0 151 47.0
BolC5t30852H Brassica oleracea HOM05D009138 ORTHO05D011294 3.6e-17 92.0 151 47.0
AL1G35990 Arabidopsis lyrata HOM05D009138 ORTHO05D011294 6.2e-17 91.3 146 55.5
BcaB07g32257 Brassica carinata HOM05D000076 ORTHO05D002730 5.3e-16 88.2 83 59.0
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 5.3e-16 88.2 124 46.0
BolC2t09009H Brassica oleracea HOM05D009138 ORTHO05D011294 6.9e-16 87.8 62 79.0
Carub.0001s2200 Capsella rubella HOM05D009138 ORTHO05D011294 1.5e-15 86.7 151 43.0
CARHR022810 Cardamine hirsuta HOM05D009138 ORTHO05D011294 2.0e-15 86.3 152 44.7
BcaB03g14202 Brassica carinata HOM05D009138 ORTHO05D011294 2.9e-14 82.4 145 45.5
BcaC05g26173 Brassica carinata HOM05D009138 ORTHO05D011294 3.8e-14 82.0 83 56.6
Aa31LG7G6390 Aethionema arabicum HOM05D009138 ORTHO05D011294 1.1e-13 80.5 147 43.5


User provided reference genes

Program Settings