Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 0.0e+00 1087.8 542 100.0
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 5.5e-274 947.2 569 87.7
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 5.5e-274 947.2 569 87.7
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 9.8e-271 936.4 580 85.7
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 9.8e-271 936.4 580 85.7
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 9.8e-271 936.4 580 85.7
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 7.2e-258 893.6 605 79.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.2e-253 878.2 601 77.7
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 4.6e-252 874.4 584 80.8
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 3.9e-251 871.3 574 81.5
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.5e-250 869.4 574 81.4
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.2e-249 866.3 573 80.6
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.1e-249 865.5 573 80.5
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 4.9e-246 854.4 568 81.0
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.2e-241 839.7 586 77.3
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 4.9e-238 827.8 587 76.1
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 5.4e-237 824.3 592 75.3
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 3.7e-230 801.6 586 74.4
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.1e-221 773.5 603 68.0
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.6e-210 734.6 593 67.1
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 3.5e-204 715.3 509 74.3
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 5.1e-203 711.4 610 63.0
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 3.2e-197 692.2 452 76.3
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.1e-194 683.7 500 69.2
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.3e-193 680.2 436 77.8
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 2.1e-193 679.5 432 78.5
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 1.8e-192 676.4 458 74.9
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 9.0e-192 674.1 432 78.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.2e-190 669.5 446 74.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 8.4e-190 667.5 445 76.0
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 8.4e-190 667.5 452 75.9
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.4e-189 666.8 552 65.2
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 7.2e-189 664.5 575 64.5
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.1e-188 662.9 451 73.8
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 3.5e-188 662.1 562 62.8
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 7.9e-188 661.0 542 64.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.3e-187 660.2 532 65.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.3e-187 659.4 519 67.8
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 5.1e-187 658.3 436 76.4
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 5.1e-187 658.3 590 61.7
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.7e-187 657.5 434 75.8
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 8.7e-187 657.5 448 74.1
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.5e-186 656.8 438 75.1
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.9e-186 656.4 456 73.0
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 9.7e-186 654.1 459 73.4
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.3e-185 653.7 560 63.2
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 6.3e-185 651.4 549 64.3
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.1e-184 650.6 542 64.2
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 1.1e-184 650.6 536 63.6
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.1e-184 650.6 439 73.6
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.4e-184 649.4 411 77.9
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 3.1e-184 649.0 540 64.3
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.2e-183 647.1 487 69.0
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.0e-183 646.4 474 68.8
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.0e-183 646.4 570 62.6
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 3.4e-183 645.6 455 72.1
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.5e-183 645.2 559 61.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 5.9e-183 644.8 413 77.5
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 5.9e-183 644.8 551 62.4
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 7.7e-183 644.4 453 72.8
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.0e-182 644.0 440 73.4
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 2.9e-182 642.5 455 72.1
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 3.8e-182 642.1 424 75.9
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 5.0e-182 641.7 592 59.5
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 5.0e-182 641.7 546 64.3
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.1e-181 640.6 448 72.8
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 1.4e-181 640.2 440 72.3
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 3.2e-181 639.0 435 73.3
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 4.2e-181 638.6 609 59.3
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 7.2e-181 637.9 445 73.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 9.4e-181 637.5 431 73.5
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 2.1e-180 636.3 433 73.2
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.7e-180 636.0 399 78.9
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.6e-180 635.6 458 70.3
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 3.6e-180 635.6 442 72.6
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 6.1e-180 634.8 442 72.9
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 6.1e-180 634.8 426 73.2
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.3e-179 632.9 584 58.2
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 3.3e-178 629.0 441 71.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 4.3e-178 628.6 439 72.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 4.3e-178 628.6 516 65.9
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 5.7e-178 628.2 426 74.4
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 9.7e-178 627.5 486 65.8
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.7e-177 626.7 414 74.2
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 2.2e-177 626.3 406 77.1
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.2e-177 626.3 405 77.0
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 3.7e-177 625.5 595 59.0
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 8.2e-177 624.4 406 75.6
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 8.2e-177 624.4 449 70.2
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.1e-176 624.0 406 76.6
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.1e-176 624.0 406 76.6
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-176 623.2 555 60.4
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.4e-176 622.9 432 74.5
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 2.4e-176 622.9 405 76.5
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.4e-176 622.9 468 69.0
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 3.1e-176 622.5 593 59.4
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 3.1e-176 622.5 447 70.7
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 3.1e-176 622.5 581 59.0
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.9e-176 621.3 480 67.5
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 9.1e-176 620.9 439 71.3
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.2e-175 620.5 542 61.3
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.0e-175 619.8 432 72.5
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 3.4e-175 619.0 448 70.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 4.5e-175 618.6 597 59.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 5.9e-175 618.2 497 65.0
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.7e-175 617.8 407 74.7
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.7e-175 617.8 485 66.4
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.2e-174 616.3 548 60.8
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.2e-174 616.3 459 69.7
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.9e-174 615.9 407 76.2
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.9e-174 615.9 438 70.1
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.8e-174 615.5 438 71.0
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 6.5e-174 614.8 439 70.8
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.5e-174 614.4 518 63.3
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 8.5e-174 614.4 405 75.3
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.4e-173 613.6 560 59.6
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.9e-173 613.2 578 58.5
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 4.2e-173 612.1 438 69.2
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 4.2e-173 612.1 408 74.8
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.5e-173 611.7 575 58.6
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 5.5e-173 611.7 453 67.8
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 9.4e-173 610.9 412 73.8
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 4.7e-172 608.6 411 73.0
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 4.7e-172 608.6 506 62.6
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.5e-170 603.6 404 74.3
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 2.6e-170 602.8 537 61.5
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 3.7e-169 599.0 464 65.5
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 6.3e-169 598.2 406 72.4
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 5.9e-167 591.7 406 71.7
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 7.2e-165 584.7 499 62.7
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 9.4e-165 584.3 386 74.4
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 7.0e-160 568.2 451 64.5
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.8e-158 562.4 462 62.8
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.0e-158 562.0 362 76.8
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 4.4e-154 548.9 344 78.2
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 4.7e-148 528.9 422 64.9
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.3e-142 510.8 355 69.6
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.7e-142 510.4 567 53.1
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.8e-142 509.2 418 62.4
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 8.6e-142 508.1 498 56.2
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 1.2e-130 471.1 365 65.5
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 5.4e-128 462.2 311 71.1
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.3e-125 453.0 373 63.8
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 2.7e-111 406.8 209 93.8
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 3.8e-105 386.3 197 94.4
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-94 350.5 180 93.3
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 5.1e-94 349.4 382 50.3
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.7e-76 290.0 363 49.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 1.7e-73 281.2 265 59.2
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.7e-73 281.2 159 81.1
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.9e-73 280.4 156 82.7
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.9e-73 280.4 156 82.7
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 4.2e-64 250.0 357 38.1
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 7.2e-64 249.2 192 64.6
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.0e-62 245.4 183 70.5
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.5e-53 214.9 302 38.1
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 7.4e-53 212.6 128 82.8
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-51 208.8 151 74.2
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.1e-51 206.8 164 67.7
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 5.3e-51 206.5 109 92.7
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.6e-47 193.7 288 37.2
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.1e-43 182.2 127 75.6
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 2.2e-36 157.9 83 88.0
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.7e-36 157.1 110 69.1
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 7.0e-35 152.9 98 80.6
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 2.7e-34 151.0 83 83.1
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.9e-32 144.8 215 38.6
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 2.5e-32 144.4 167 53.3
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.5e-32 143.3 88 75.0
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 6.1e-23 113.2 101 60.4
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.5e-21 108.6 118 50.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.7e-12 78.6 182 31.9
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 2.9e-12 77.8 50 80.0
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 4.6e-10 70.5 111 41.4
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 1.5e-08 65.5 108 37.0
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 2.8e-07 61.2 32 84.4


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