Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24691 Brassica carinata HOM05D010479 ORTHO05D007393 2.4e-75 285.4 147 100.0
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 2.1e-50 202.6 166 75.3
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 2.1e-50 202.6 166 75.3
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 6.1e-50 201.1 176 68.2
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 1.8e-49 199.5 176 68.2
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 1.3e-44 183.3 170 64.7
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 1.3e-44 183.3 170 64.7
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 1.4e-43 179.9 172 64.0
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 5.5e-43 177.9 172 64.5
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 1.6e-42 176.4 154 72.7
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 2.7e-42 175.6 178 63.5
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 2.7e-42 175.6 172 64.0
BraA07t30685Z Brassica rapa HOM05D001833 ORTHO05D001776 2.7e-42 175.6 172 62.8
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 2.3e-41 172.6 176 63.6
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 6.7e-41 171.0 178 62.4
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 2.6e-40 169.1 167 62.9
A07p30490 Brassica napus HOM05D001833 ORTHO05D001776 3.7e-39 165.2 172 61.0
BcaB03g15626 Brassica carinata HOM05D010479 ORTHO05D007393 2.0e-37 159.5 153 64.1
BcaC08g45747 Brassica carinata HOM05D010479 ORTHO05D007393 2.0e-37 159.5 153 64.1
Carub.0002s1869 Capsella rubella HOM05D010479 ORTHO05D007393 2.0e-37 159.5 182 56.6
BcaB03g15625 Brassica carinata HOM05D010479 ORTHO05D007393 1.7e-36 156.4 170 60.0
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 1.1e-35 153.7 168 58.9
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 1.1e-35 153.7 163 62.6
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 2.5e-35 152.5 160 61.9
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 4.2e-35 151.8 160 61.2
BcaB03g14910 Brassica carinata HOM05D010479 ORTHO05D007393 6.8e-25 117.9 115 59.1
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 1.7e-23 113.2 164 51.2
Aa31LG4G8710 Aethionema arabicum HOM05D010479 ORTHO05D007393 2.8e-23 112.5 158 52.5
BolC6t38631H Brassica oleracea HOM05D001833 ORTHO05D001776 1.1e-22 110.5 92 71.7
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 1.3e-20 103.6 113 56.6
THA.LOC104809743 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 1.0e-09 67.4 143 44.1
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.6e-08 62.8 171 32.2
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 2.2e-07 59.7 167 33.5
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 2.9e-07 59.3 171 37.4
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 4.9e-07 58.5 180 32.2
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 1.1e-06 57.4 170 34.1
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.9e-06 56.6 175 31.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.9e-06 56.6 161 32.9
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 5.4e-06 55.1 159 32.1
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 7.0e-06 54.7 163 31.3
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 9.2e-06 54.3 164 31.1
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 9.2e-06 54.3 160 31.9


User provided reference genes

Program Settings