Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24681 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-32 139.8 62 100.0
BcaB07g33212 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-22 106.7 57 75.4
BcaB05g22440 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-21 104.8 51 88.2
BcaB01g02582 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-20 102.4 60 68.3
BolC1t04765H Brassica oleracea HOM05D001498 ORTHO05D008559 1.2e-20 102.4 60 70.0
BcaB05g22881 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-20 102.1 57 71.9
BcaB05g22949 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-20 102.1 57 71.9
BcaB04g17595 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-20 101.3 57 71.9
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 8.0e-20 99.8 60 68.3
BolC5t33265H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-19 99.0 57 70.2
BraA01t02472Z Brassica rapa HOM05D001498 ORTHO05D008559 1.4e-19 99.0 57 70.2
BcaC05g28455 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-19 98.6 57 68.4
BolC5t32332H Brassica oleracea HOM05D001498 ORTHO05D008559 1.8e-19 98.6 57 68.4
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-19 98.2 57 70.2
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-19 97.8 57 68.4
BolC4t26384H Brassica oleracea HOM05D001498 ORTHO05D008559 4.0e-19 97.4 57 70.2
BraSC37t46120Z Brassica rapa HOM05D001498 ORTHO05D008559 4.0e-19 97.4 57 68.4
BcaB04g17364 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-19 97.1 57 68.4
BcaB07g33942 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-19 97.1 57 66.7
BraA03t15279Z Brassica rapa HOM05D001498 ORTHO05D008559 5.2e-19 97.1 57 70.2
BcaB05g24510 Brassica carinata HOM05D001498 ORTHO05D008559 6.8e-19 96.7 57 70.2
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 6.8e-19 96.7 57 68.4
BraA01t01574Z Brassica rapa HOM05D001498 ORTHO05D008559 6.8e-19 96.7 57 70.2
BcaC02g12296 Brassica carinata HOM05D001498 ORTHO05D008559 8.9e-19 96.3 57 68.4
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-18 95.9 57 68.4
BolC3t20363H Brassica oleracea HOM05D001498 ORTHO05D008559 1.2e-18 95.9 57 68.4
BcaC06g36175 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-18 95.1 57 68.4
BcaC06g35772 Brassica carinata HOM05D001498 ORTHO05D008559 5.8e-18 93.6 57 66.7
BolC6t36794H Brassica oleracea HOM05D001498 ORTHO05D008559 5.8e-18 93.6 57 66.7
BolC7t41574H Brassica oleracea HOM05D001498 ORTHO05D008559 5.8e-18 93.6 57 66.7
BcaB01g01370 Brassica carinata HOM05D001498 ORTHO05D008559 9.8e-18 92.8 57 66.7
BcaB05g23075 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-17 91.7 57 66.7
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-17 91.3 57 64.9
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-17 91.3 57 64.9
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.7e-17 90.9 57 66.7
BcaB06g26762 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-17 90.1 57 66.7
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-17 90.1 57 61.4
BcaB07g33318 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-17 90.1 57 64.9
BcaB05g23540 Brassica carinata HOM05D001498 ORTHO05D008559 8.3e-17 89.7 57 64.9
BcaC07g39106 Brassica carinata HOM05D001498 ORTHO05D008559 8.3e-17 89.7 54 68.5
BolC2t11287H Brassica oleracea HOM05D001498 ORTHO05D008559 8.3e-17 89.7 57 64.9
BolC3t16975H Brassica oleracea HOM05D001498 ORTHO05D008559 1.1e-16 89.4 57 66.7
BcaB02g11055 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-16 89.0 59 64.4
BcaB04g17610 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 63.2
BcaC05g27520 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
BcaC08g44055 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-16 89.0 57 64.9
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-16 89.0 57 64.9
BraA03t14503Z Brassica rapa HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
BraA09t40147Z Brassica rapa HOM05D001498 ORTHO05D008559 1.4e-16 89.0 57 64.9
BcaB01g01483 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-16 88.6 57 63.2
BcaC05g26788 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-16 88.6 57 64.9
BcaB01g01186 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-16 87.8 57 63.2
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 3.2e-16 87.8 57 63.2
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.2e-16 87.8 57 63.2
BcaB01g01310 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 63.2
BcaB06g26482 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 64.9
BcaB06g26728 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 64.9
BcaB06g27025 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 63.2
BcaB07g32209 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 64.9
BolC1t01630H Brassica oleracea HOM05D001498 ORTHO05D008559 4.1e-16 87.4 58 62.1
BolC8t49594H Brassica oleracea HOM05D001498 ORTHO05D008559 4.1e-16 87.4 57 64.9
BcaB03g16805 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-16 87.0 57 63.2
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-16 86.7 57 63.2
BolC3t13891H Brassica oleracea HOM05D001498 ORTHO05D008559 7.0e-16 86.7 58 62.1
BcaB04g17975 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-15 85.9 57 63.2
BcaB07g33755 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-15 85.9 57 63.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-15 85.9 57 63.2
BcaNung05286 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-15 85.9 57 63.2
BcaB04g17679 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-15 85.5 57 63.2
BcaC04g22430 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-15 85.5 57 63.2
BcaC01g02506 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-15 85.1 57 63.2
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-15 85.1 57 63.2
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-15 85.1 57 63.2
BcaB07g32914 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-15 84.7 57 63.2
BcaB05g23076 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-15 84.3 57 61.4
BcaB03g16073 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-14 82.8 57 57.9
BcaB05g23121 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-14 82.8 57 61.4
BcaB06g27857 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-14 82.8 57 61.4
BcaC04g19550 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-14 82.4 54 64.8
BcaC05g26790 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-14 82.4 57 61.4
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 1.7e-14 82.0 55 61.8
BcaB05g23432 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-14 81.6 57 61.4
BcaB02g11278 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-14 81.3 57 61.4
BcaB01g03186 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-14 80.1 58 63.8
BcaC01g03922 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-14 80.1 48 68.8
BcaB01g01571 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-13 79.0 59 54.2
BcaB07g33219 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-13 79.0 57 59.6
BcaC05g25871 Brassica carinata HOM05D001498 ORTHO05D008559 5.6e-13 77.0 48 64.6
BcaB07g33083 Brassica carinata HOM05D001498 ORTHO05D008559 6.2e-12 73.6 48 64.6
BcaC01g02040 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-11 72.8 57 49.1
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 1.1e-11 72.8 57 49.1
BcaB05g22954 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-11 72.0 43 62.8
BcaC07g38656 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-11 71.2 50 56.0
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-10 68.9 51 56.9
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-10 68.6 37 73.0
BcaC04g21442 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-10 68.2 58 53.4
BolC9t57419H Brassica oleracea HOM05D001498 ORTHO05D008559 3.4e-10 67.8 57 52.6
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 4.4e-10 67.4 57 50.9
BcaC05g27621 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-09 64.7 53 56.6
BcaC07g37924 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-09 64.7 57 47.4
BcaC04g20283 Brassica carinata HOM05D001498 ORTHO05D008559 4.9e-09 63.9 57 50.9
BcaB04g18490 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-09 63.5 45 60.0
C07p06240 Brassica napus HOM05D001498 ORTHO05D016111 2.4e-08 61.6 53 47.2
BcaC05g27664 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-07 59.3 57 43.9
BolC7t41041H Brassica oleracea HOM05D001498 ORTHO05D008559 1.6e-07 58.9 51 49.0
BolC7t40933H Brassica oleracea HOM05D001498 ORTHO05D008559 2.7e-07 58.2 57 42.1
BolC1t03832H Brassica oleracea HOM05D001498 ORTHO05D008559 3.5e-07 57.8 57 42.1
C09p45500 Brassica napus HOM05D001498 ORTHO05D016111 4.6e-07 57.4 53 45.3
BolC9t57109H Brassica oleracea HOM05D001498 ORTHO05D008559 1.0e-06 56.2 57 38.6
BcaC01g01872 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-06 55.8 57 43.9
Sp4g09440 Schrenkiella parvula HOM05D001308 ORTHO05D001170 6.6e-06 53.5 62 40.3


User provided reference genes

Program Settings