Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24668 Brassica carinata HOM05D004771 ORTHO05D005565 7.0e-66 254.2 170 100.0
BcaC03g15291 Brassica carinata HOM05D004771 ORTHO05D005565 4.3e-55 218.4 170 84.1
C02p28980 Brassica napus HOM05D004771 ORTHO05D005565 4.3e-55 218.4 170 84.1
BraA02t06780Z Brassica rapa HOM05D004771 ORTHO05D005565 2.8e-54 215.7 170 83.5
A02p17330 Brassica napus HOM05D004771 ORTHO05D005565 4.7e-54 214.9 170 82.9
BolC2t08948H Brassica oleracea HOM05D004771 ORTHO05D005565 7.5e-52 207.6 171 88.3
BcaC02g09527 Brassica carinata HOM05D004771 ORTHO05D005565 4.9e-51 204.9 170 75.9
C04p43760 Brassica napus HOM05D004771 ORTHO05D005565 4.9e-51 204.9 170 75.9
BolC4t25958H Brassica oleracea HOM05D004771 ORTHO05D005565 4.9e-51 204.9 170 75.9
BraA07t31335Z Brassica rapa HOM05D004771 ORTHO05D005565 1.0e-45 187.2 177 80.2
A07p37720 Brassica napus HOM05D004771 ORTHO05D005565 3.4e-44 182.2 179 78.8
Sp5g26590 Schrenkiella parvula HOM05D004771 ORTHO05D005565 3.7e-43 178.7 178 78.1
C06p45590 Brassica napus HOM05D004771 ORTHO05D005565 1.1e-42 177.2 177 78.0
BolC6t39610H Brassica oleracea HOM05D004771 ORTHO05D005565 1.1e-42 177.2 177 78.0
Thhalv10019781m.g Eutrema salsugineum HOM05D004771 ORTHO05D005565 1.1e-42 177.2 178 68.0
CARHR291250 Cardamine hirsuta HOM05D004771 ORTHO05D005565 1.1e-39 167.2 171 73.7
Carub.0002s1828 Capsella rubella HOM05D004771 ORTHO05D005565 2.1e-38 162.9 178 68.5
Aa31LG2G7800 Aethionema arabicum HOM05D004771 ORTHO05D005565 4.9e-35 151.8 164 67.1
AT1G71430 Arabidopsis thaliana HOM05D004771 ORTHO05D005565 7.8e-33 144.4 174 65.5
AL2G31090 Arabidopsis lyrata HOM05D004771 ORTHO05D005565 3.9e-32 142.1 173 64.7
THA.LOC104816989 Tarenaya hassleriana HOM05D004771 ORTHO05D005565 1.2e-28 130.6 126 62.7
Thecc.02G032500 Theobroma cacao HOM05D004771 ORTHO05D005565 8.4e-27 124.4 125 59.2
CANSAT25G2974 Cannabis sativa HOM05D004771 ORTHO05D005565 4.1e-26 122.1 124 55.6
Ciclev10029331m.g Citrus clementina HOM05D004771 ORTHO05D005565 7.1e-26 121.3 192 43.2
CANSAT25G0049 Cannabis sativa HOM05D004771 ORTHO05D005565 9.2e-26 120.9 124 54.8
QL11p028495 Quercus lobata HOM05D004771 ORTHO05D005565 2.7e-25 119.4 137 51.8
Ciclev10029295m.g Citrus clementina HOM05D004771 ORTHO05D005565 3.5e-25 119.0 191 42.9
COL.COLO4_17806 Corchorus olitorius HOM05D004771 ORTHO05D005565 6.0e-25 118.2 134 54.5
COL.COLO4_26627 Corchorus olitorius HOM05D004771 ORTHO05D005565 2.3e-24 116.3 123 56.1
Duzib132G0558 Durio zibethinus HOM05D004771 ORTHO05D005565 8.6e-24 114.4 127 53.5
Cpa.g.c27001.4 Carica papaya HOM05D004771 ORTHO05D005565 1.5e-23 113.6 121 57.9
AUR62009845 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.5e-23 113.6 122 54.9
QL09p037751 Quercus lobata HOM05D004771 ORTHO05D005565 1.9e-23 113.2 125 53.6
Gohir.D01G171700 Gossypium hirsutum HOM05D004771 ORTHO05D005565 5.6e-23 111.7 123 52.8
AUR62038158 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.2e-22 110.5 122 54.1
GSVIVG01022390001 Vitis vinifera HOM05D004771 ORTHO05D005565 1.2e-22 110.5 122 51.6
GSVIVG01037017001 Vitis vinifera HOM05D004771 ORTHO05D005565 1.6e-22 110.2 122 51.6
Gohir.A01G180600 Gossypium hirsutum HOM05D004771 ORTHO05D005565 2.1e-22 109.8 123 52.0
Gorai.002G213200 Gossypium raimondii HOM05D004771 ORTHO05D005565 2.1e-22 109.8 128 53.1
Atru.chr4.2044 Acer truncatum HOM05D004771 ORTHO05D005565 2.8e-22 109.4 127 53.5
Migut.M00048 Erythranthe guttata HOM05D004771 ORTHO05D005565 2.8e-22 109.4 187 45.5
TWI23G0030 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 4.7e-22 108.6 122 51.6
Nn2g15843 Nelumbo nucifera HOM05D004771 ORTHO05D005565 6.2e-22 108.2 123 51.2
Nn4g25002 Nelumbo nucifera HOM05D004771 ORTHO05D005565 8.1e-22 107.8 119 50.4
Prupe.8G152600 Prunus persica HOM05D004771 ORTHO05D005565 8.1e-22 107.8 122 52.5
Hund20829 Selenicereus undatus HOM05D004771 ORTHO05D005565 8.1e-22 107.8 119 52.9
PGR142G3141 Punica granatum HOM05D004771 ORTHO05D005565 1.1e-21 107.5 121 53.7
Sed0002941 Sechium edule HOM05D004771 ORTHO05D005565 1.4e-21 107.1 119 52.1
Haze_10334 Corylus avellana HOM05D004771 ORTHO05D005565 1.8e-21 106.7 121 53.7
Cfa004725 Carpinus fangiana HOM05D004771 ORTHO05D005565 2.4e-21 106.3 121 53.7
CiPaw.05G182000 Carya illinoinensis HOM05D004771 ORTHO05D005565 3.1e-21 105.9 121 54.5
Potri.015G035700 Populus trichocarpa HOM05D004771 ORTHO05D005565 3.1e-21 105.9 127 49.6
TAR625G0649 Trochodendron aralioides HOM05D004771 ORTHO05D005565 5.2e-21 105.1 123 52.0
CANSAT56G2106 Cannabis sativa HOM05D004771 ORTHO05D005565 6.9e-21 104.8 167 40.1
PSO170G1452 Papaver somniferum HOM05D004771 ORTHO05D005565 8.9e-21 104.4 136 47.1
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea HOM05D004771 ORTHO05D005565 1.2e-20 104.0 132 49.2
EL10Ac7g16361 Beta vulgaris HOM05D004771 ORTHO05D005565 3.4e-20 102.4 120 50.8
TPR.G31901 Trifolium pratense HOM05D004771 ORTHO05D005565 3.4e-20 102.4 121 55.4
FvH4_2g02960 Fragaria vesca HOM05D004771 ORTHO05D005565 4.4e-20 102.1 119 48.7
FAN24G0749 Fragaria x ananassa HOM05D004771 ORTHO05D005565 4.4e-20 102.1 119 48.7
Manes.10G087700 Manihot esculenta HOM05D004771 ORTHO05D005565 4.4e-20 102.1 120 48.3
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 7.6e-20 101.3 85 65.9
PSO017G4159 Papaver somniferum HOM05D004771 ORTHO05D005565 7.6e-20 101.3 120 48.3
Phvul.007G048400 Phaseolus vulgaris HOM05D004771 ORTHO05D005565 7.6e-20 101.3 121 52.1
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala HOM05D001377 ORTHO05D005565 9.9e-20 100.9 137 47.4
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea HOM05D004771 ORTHO05D005565 9.9e-20 100.9 190 43.2
Psat6g007560 Pisum sativum HOM05D004771 ORTHO05D005565 9.9e-20 100.9 122 51.6
TWI14G0977 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 9.9e-20 100.9 121 50.4
MELO3C013897.2 Cucumis melo HOM05D004771 ORTHO05D005565 1.3e-19 100.5 119 48.7
RcHm_v2.0_Chr6g0247751 Rosa chinensis HOM05D004771 ORTHO05D005565 1.3e-19 100.5 118 50.0
Aqoxy5G00826 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.7e-19 100.1 196 40.3
MSTRG.6635 Avicennia marina HOM05D004771 ORTHO05D005565 1.7e-19 100.1 125 47.2
Glyma.20G137100 Glycine max HOM05D004771 ORTHO05D005565 1.7e-19 100.1 83 66.3
Actinidia33010 Actinidia chinensis HOM05D004771 ORTHO05D005565 2.2e-19 99.8 130 45.4
CSS0030116 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 2.2e-19 99.8 124 49.2
ClCG10G002170 Citrullus lanatus HOM05D004771 ORTHO05D005565 2.2e-19 99.8 119 51.3
MD10G1112800 Malus domestica HOM05D004771 ORTHO05D005565 2.2e-19 99.8 135 45.9
Lj5g0002463 Lotus japonicus HOM05D004771 ORTHO05D005565 2.9e-19 99.4 131 49.6
Medtr1g009780 Medicago truncatula HOM05D004771 ORTHO05D005565 2.9e-19 99.4 87 63.2
TAR628G1069 Trochodendron aralioides HOM05D004771 ORTHO05D005565 2.9e-19 99.4 123 50.4
ATR0736G167 Amborella trichopoda HOM05D004771 ORTHO05D005565 3.8e-19 99.0 128 49.2
Dinv22681 Davidia involucrata HOM05D004771 ORTHO05D005565 3.8e-19 99.0 81 66.7
Lj8P345T14 Lonicera japonica HOM05D004771 ORTHO05D005565 3.8e-19 99.0 168 41.7
PGSC0003DMG400028994 Solanum tuberosum HOM05D004771 ORTHO05D005565 3.8e-19 99.0 154 47.4
VMungo0720G1115 Vigna mungo HOM05D004771 ORTHO05D005565 3.8e-19 99.0 79 68.4
CsaV3_3G002260 Cucumis sativus L. HOM05D004771 ORTHO05D005565 4.9e-19 98.6 123 49.6
TPR.G12006 Trifolium pratense HOM05D004771 ORTHO05D005565 4.9e-19 98.6 123 48.8
CAN.G630.7 Capsicum annuum HOM05D004771 ORTHO05D005565 6.4e-19 98.2 187 46.5
DCAR_007735 Daucus carota HOM05D004771 ORTHO05D005565 6.4e-19 98.2 132 47.7
PSO170G1616 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-18 97.1 121 47.1
PSO528G0234 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-18 97.1 121 46.3
Nitab4.5_0000575g0030 Nicotiana tabacum HOM05D004771 ORTHO05D005565 1.9e-18 96.7 154 50.0
CDE02G0226 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 2.4e-18 96.3 174 46.0
Lj8C288T1 Lonicera japonica HOM05D004771 ORTHO05D005565 2.4e-18 96.3 96 58.3
CSS0010443 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 3.2e-18 95.9 124 48.4
Eucgr.C02425 Eucalyptus grandis HOM05D004771 ORTHO05D005565 3.2e-18 95.9 135 45.9
HanXRQChr05g0160091 Helianthus annuus HOM05D004771 ORTHO05D005565 3.2e-18 95.9 85 62.4
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 4.2e-18 95.5 142 45.8
unitig_899.g15063 Utricularia gibba HOM05D004771 ORTHO05D005565 4.2e-18 95.5 88 59.1
Ca_12871_v3 Cicer arietinum L. HOM05D004771 ORTHO05D005565 5.4e-18 95.1 76 67.1
Lalb_Chr02g0144821 Lupinus albus HOM05D004771 ORTHO05D005565 5.4e-18 95.1 96 58.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 7.1e-18 94.7 85 60.0
Sc12g0010390 Simmondsia chinensis HOM05D004771 ORTHO05D005565 7.1e-18 94.7 82 62.2
Aqoxy3G04244 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 9.3e-18 94.4 150 44.0
Dinv44219 Davidia involucrata HOM05D000703 ORTHO05D000633 9.3e-18 94.4 124 49.2
ECA248G2169 Erigeron canadensis HOM05D004771 ORTHO05D005565 1.2e-17 94.0 85 62.4
Aqoxy3G02687 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.6e-17 93.6 93 55.9
Sopen04g019850 Solanum pennellii HOM05D004771 ORTHO05D005565 1.6e-17 93.6 85 62.4
MBI13_g09224_MAGBIO Magnolia biondii HOM05D004771 ORTHO05D005565 2.1e-17 93.2 128 45.3
BcaC08g46579 Brassica carinata HOM05D004771 ORTHO05D005565 2.7e-17 92.8 85 83.5
Cc02_g28780 Coffea canephora HOM05D004771 ORTHO05D005565 2.7e-17 92.8 85 60.0
Lj6g0021608 Lotus japonicus HOM05D004771 ORTHO05D005565 2.7e-17 92.8 132 47.0
Solyc04g049660.3 Solanum lycopersicum HOM05D004771 ORTHO05D005565 3.5e-17 92.4 85 61.2
PGSC0003DMG400005017 Solanum tuberosum HOM05D004771 ORTHO05D005565 3.5e-17 92.4 80 65.0
MD05G1109000 Malus domestica HOM05D004771 ORTHO05D005565 4.6e-17 92.0 144 45.1
Nitab4.5_0002078g0010 Nicotiana tabacum HOM05D004771 ORTHO05D005565 6.0e-17 91.7 81 63.0
Peaxi162Scf00170g00041 Petunia axillaris HOM05D004771 ORTHO05D005565 7.8e-17 91.3 122 49.2
Eucgr.I02508 Eucalyptus grandis HOM05D004771 ORTHO05D005565 1.0e-16 90.9 121 45.5
CDE05G2657 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 1.3e-16 90.5 147 41.5
CAN.G490.38 Capsicum annuum HOM05D004771 ORTHO05D005565 1.7e-16 90.1 98 55.1
DCAR_027620 Daucus carota HOM05D004771 ORTHO05D005565 2.3e-16 89.7 86 58.1
SGA_v2.0_scaffold181G39690 Striga asiatica HOM05D004771 ORTHO05D005565 2.3e-16 89.7 112 48.2
Medtr3g080910 Medicago truncatula HOM05D004771 ORTHO05D005565 6.6e-16 88.2 70 67.1
RhsimUnG0159200 Rhododendron simsii HOM05D004771 ORTHO05D005565 5.6e-15 85.1 126 44.4
Os01g0617800 Oryza sativa ssp. japonica HOM05D004771 ORTHO05D005565 9.6e-15 84.3 80 55.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 9.6e-15 84.3 95 47.4
Manes.07G051000 Manihot esculenta HOM05D004771 ORTHO05D005565 1.3e-14 84.0 67 65.7
Zm00001eb159770 Zea mays HOM05D004771 ORTHO05D005565 1.6e-14 83.6 76 57.9
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea HOM05D004771 ORTHO05D005565 2.1e-14 83.2 79 62.0
Zm00001eb002910 Zea mays HOM05D004771 ORTHO05D005565 3.6e-14 82.4 76 56.6
Zm00001eb003040 Zea mays HOM05D004771 ORTHO05D005565 3.6e-14 82.4 76 56.6
AUR62017723 Chenopodium quinoa HOM05D004771 ORTHO05D005565 8.1e-14 81.3 80 60.0
Sed0006388 Sechium edule HOM05D004771 ORTHO05D005565 1.8e-13 80.1 75 58.7
SEGI_32093 Sequoiadendron giganteum HOM05D004771 ORTHO05D005565 3.1e-13 79.3 75 58.7
CARHR045930 Cardamine hirsuta HOM05D004771 ORTHO05D005565 5.3e-13 78.6 119 45.4
Mapoly0060s0029 Marchantia polymorpha HOM05D004771 ORTHO05D005565 9.0e-13 77.8 123 42.3
Gohir.D01G171500 Gossypium hirsutum HOM05D004771 ORTHO05D005565 1.5e-12 77.0 60 68.3
vmacro05477 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 4.5e-12 75.5 80 56.2
HanXRQChr11g0345411 Helianthus annuus HOM05D004771 ORTHO05D005565 2.2e-11 73.2 124 43.5
SalBow7G1175 Salvia bowleyana HOM05D004771 ORTHO05D005565 3.8e-11 72.4 145 36.6
arahy.Tifrunner.gnm1.ann1.S1TJ9S Arachis hypogaea HOM05D004771 ORTHO05D005565 8.4e-11 71.2 69 60.9
Pp3c4_10090 Physcomitrium patens HOM05D004771 ORTHO05D005565 8.4e-11 71.2 121 43.8
Rhsim09G0033000 Rhododendron simsii HOM05D004771 ORTHO05D005565 9.3e-10 67.8 93 47.3
vmacro00584 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 6.0e-09 65.1 46 71.7
arahy.Tifrunner.gnm1.ann1.P0FJQ9 Arachis hypogaea HOM05D004771 ORTHO05D005565 1.0e-08 64.3 56 66.1
Rhsim02G0173400 Rhododendron simsii HOM05D004771 ORTHO05D005565 2.3e-08 63.2 44 70.5
Oeu012349.1 Olea europaea HOM05D004771 ORTHO05D005565 6.7e-08 61.6 53 66.0
Nitab4.5_0001458g0040 Nicotiana tabacum HOM05D004771 ORTHO05D005565 8.7e-08 61.2 43 74.4
arahy.Tifrunner.gnm1.ann1.MQV2C0 Arachis hypogaea HOM05D004771 ORTHO05D005565 9.6e-07 57.8 52 61.5
SMO244G0085 Selaginella moellendorffii HOM05D004771 ORTHO05D005565 9.6e-07 57.8 81 44.4
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 2.1e-06 56.6 45 62.2
Glyma.10G254400 Glycine max HOM05D004771 ORTHO05D005565 3.7e-06 55.8 73 47.9


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