Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24633 Brassica carinata HOM05D009085 ORTHO05D010299 9.4e-50 200.3 133 100.0
C02p28490 Brassica napus HOM05D009085 ORTHO05D010299 2.9e-35 152.1 125 84.8
BolC2t08890H Brassica oleracea HOM05D009085 ORTHO05D010299 2.9e-35 152.1 125 84.8
AT1G70990 Arabidopsis thaliana HOM05D009085 ORTHO05D010299 1.7e-30 136.3 139 71.2
AL2G30540 Arabidopsis lyrata HOM05D009085 ORTHO05D010299 2.8e-30 135.6 136 73.5
BcaB03g14860 Brassica carinata HOM05D009085 ORTHO05D010299 4.8e-30 134.8 133 78.2
A07p37390 Brassica napus HOM05D009085 ORTHO05D010299 4.8e-30 134.8 135 69.6
BraA07t31297Z Brassica rapa HOM05D009085 ORTHO05D010299 4.8e-30 134.8 135 69.6
C06p45080 Brassica napus HOM05D009085 ORTHO05D010299 4.1e-29 131.7 132 69.7
BcaC08g46544 Brassica carinata HOM05D009085 ORTHO05D010299 5.3e-29 131.3 135 68.1
CARHR064270 Cardamine hirsuta HOM05D009085 ORTHO05D010299 5.3e-29 131.3 132 68.2
BolC6t39566H Brassica oleracea HOM05D009085 ORTHO05D010299 1.2e-28 130.2 132 68.9
Carub.0002s1778 Capsella rubella HOM05D009085 ORTHO05D010299 2.0e-28 129.4 140 68.6
Thhalv10019710m.g Eutrema salsugineum HOM05D009085 ORTHO05D010299 2.7e-28 129.0 138 73.2
AL1G36610 Arabidopsis lyrata HOM05D009085 ORTHO05D010299 1.7e-19 99.8 144 61.8
Carub.0001s2256 Capsella rubella HOM05D009085 ORTHO05D010299 4.2e-18 95.1 139 57.6
BraA09t39657Z Brassica rapa HOM05D009085 ORTHO05D010299 1.2e-17 93.6 143 57.3
A09p41680 Brassica napus HOM05D009085 ORTHO05D010299 2.1e-17 92.8 143 55.2
AT1G23040 Arabidopsis thaliana HOM05D009085 ORTHO05D010299 3.6e-17 92.0 143 60.1
Sp5g26140 Schrenkiella parvula HOM05D009085 ORTHO05D010299 8.0e-17 90.9 50 86.0
BcaB07g32301 Brassica carinata HOM05D009085 ORTHO05D010299 1.0e-16 90.5 143 55.2
Sp1g20490 Schrenkiella parvula HOM05D009085 ORTHO05D010299 1.4e-16 90.1 144 55.6
BcaC05g26215 Brassica carinata HOM05D009085 ORTHO05D010299 2.3e-16 89.4 143 53.8
C05p22250 Brassica napus HOM05D009085 ORTHO05D010299 2.3e-16 89.4 143 53.8
BcaB03g14172 Brassica carinata HOM05D009085 ORTHO05D010299 1.5e-15 86.7 144 52.1
BolC5t30925H Brassica oleracea HOM05D009085 ORTHO05D010299 2.0e-15 86.3 143 53.1
Aa31LG4G10070 Aethionema arabicum HOM05D009085 ORTHO05D010299 3.4e-15 85.5 122 67.2
BcaC06g35011 Brassica carinata HOM05D009085 ORTHO05D010299 4.4e-15 85.1 143 53.8
C07p20740 Brassica napus HOM05D009085 ORTHO05D010299 4.4e-15 85.1 143 53.8
BolC7t42605H Brassica oleracea HOM05D009085 ORTHO05D010299 4.4e-15 85.1 143 53.8
BraA07t29166Z Brassica rapa HOM05D009085 ORTHO05D010299 9.8e-15 84.0 143 51.7
A07p14080 Brassica napus HOM05D009085 ORTHO05D010299 1.7e-14 83.2 143 51.0
THA.LOC104823013 Tarenaya hassleriana HOM05D009085 ORTHO05D010299 9.2e-13 77.4 129 57.4
Sp1g01490 Schrenkiella parvula HOM05D013133 ORTHO05D015352 5.9e-12 74.7 135 57.0
CARHR023420 Cardamine hirsuta HOM05D009085 ORTHO05D010299 1.3e-11 73.6 134 53.7
CARHR001730 Cardamine hirsuta HOM05D013133 ORTHO05D015352 2.9e-11 72.4 147 48.3
Aa31LG7G7040 Aethionema arabicum HOM05D009085 ORTHO05D010299 1.1e-10 70.5 133 54.1
Carub.0001s0148 Capsella rubella HOM05D013133 ORTHO05D015352 3.6e-09 65.5 138 52.9
Thhalv10009798m.g Eutrema salsugineum HOM05D013133 ORTHO05D015352 1.0e-08 63.9 130 57.7
BolC8t52846H Brassica oleracea HOM05D013133 ORTHO05D015352 8.3e-06 54.3 135 52.6


User provided reference genes

Program Settings