Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 4.6e-123 444.5 216 100.0
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 6.4e-64 248.1 172 68.6
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-63 247.3 172 68.6
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 1.3e-48 197.2 140 65.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 3.1e-34 149.4 168 41.7
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.0e-33 146.7 164 42.7
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-31 141.0 169 42.6
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 3.2e-31 139.4 169 42.6
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-30 137.5 169 41.4
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-30 137.5 169 41.4
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 1.6e-30 137.1 169 42.0
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-29 134.4 169 40.8
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 1.0e-29 134.4 169 40.8
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-29 133.7 135 45.2
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 6.2e-27 125.2 170 38.2
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 8.1e-27 124.8 161 39.1
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 2.4e-26 123.2 137 43.8
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 4.0e-26 122.5 170 38.8
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 7.6e-25 118.2 140 41.4
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 1.7e-24 117.1 179 35.8
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 8.4e-24 114.8 169 38.5
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 1.1e-23 114.4 137 42.3
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 5.5e-23 112.1 171 35.1
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 5.5e-23 112.1 170 36.5
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 3.0e-21 106.3 171 35.1
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 5.1e-21 105.5 203 32.0
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-20 104.0 203 31.5
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 1.9e-20 103.6 171 35.7
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-20 103.2 135 39.3
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-19 100.9 193 30.6
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-16 90.9 134 35.1
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-16 90.9 134 35.1
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-16 90.5 165 33.9
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 8.4e-16 88.2 96 44.8
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 3.2e-15 86.3 132 34.8
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 5.5e-15 85.5 83 48.2
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 7.1e-15 85.1 110 40.0
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 7.1e-15 85.1 133 34.6
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 9.3e-15 84.7 84 47.6
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 1.2e-14 84.3 132 34.8
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-14 84.0 82 47.6
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 1.6e-14 84.0 82 47.6
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-14 82.8 79 48.1
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 3.0e-13 79.7 129 33.3
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-11 74.3 96 40.6
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 5.3e-10 68.9 95 34.7
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 9.0e-10 68.2 99 39.4
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 3.4e-09 66.2 78 35.9
BolC7t42687H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-08 64.3 84 40.5
A03p29610 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-08 62.4 149 27.5
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 8.5e-08 61.6 183 25.7
Carub.0001s3517 Capsella rubella HOM05D000353 ORTHO05D000174 8.5e-08 61.6 148 29.7
BraA01t03746Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-07 61.2 149 28.2
BraA01t03747Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-07 61.2 149 28.2
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-07 60.5 59 55.9
Carub.0016s0006 Capsella rubella HOM05D007965 ORTHO05D010269 2.5e-07 60.1 109 30.3
Carub.0016s0012 Capsella rubella HOM05D007965 ORTHO05D010269 2.5e-07 60.1 109 30.3
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 4.2e-07 59.3 84 34.5
BolC9t55347H Brassica oleracea HOM05D000353 ORTHO05D000174 5.5e-07 58.9 149 27.5
AL1G50690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.2e-07 58.5 206 24.3
AL4G20730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.2e-07 58.5 206 24.3
AL8G20930 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.2e-07 58.5 206 24.3
A01p27320 Brassica napus HOM05D000353 ORTHO05D000174 7.2e-07 58.5 149 27.5
BraA01t02870Z Brassica rapa HOM05D000353 ORTHO05D000174 7.2e-07 58.5 149 27.5
AL6G43510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-06 57.8 176 24.4
Carub.0007s3186 Capsella rubella HOM05D007965 ORTHO05D010269 1.2e-06 57.8 83 32.5
Carub.0001s3688 Capsella rubella HOM05D007965 ORTHO05D010269 1.6e-06 57.4 115 29.6
AL1G26430 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-06 57.0 105 27.6
BraA04t16747Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-06 57.0 146 25.3
AL2G22580 Arabidopsis lyrata HOM05D000022 ORTHO05D010269 3.6e-06 56.2 205 23.9
AL2G25150 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.6e-06 56.2 197 25.4
A07p41090 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-06 56.2 144 26.4
AL2G18690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.6e-06 55.8 205 23.9
AL2G23190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.6e-06 55.8 205 23.9
BolC8t50703H Brassica oleracea HOM05D000353 ORTHO05D000174 4.6e-06 55.8 146 24.7
AL1G55590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL1G59740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL27U10060 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL2G16090 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL3G39070 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL3G51030 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL5G12670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL5G19810 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL6G34510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL6G41960 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL7G11680 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL7G15190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL7G49540 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL8G18830 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL8G23600 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
AL9U11530 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-06 55.5 205 23.9
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 6.1e-06 55.5 102 32.4
BcaC08g46571 Brassica carinata HOM05D000353 ORTHO05D000174 6.1e-06 55.5 143 24.5
BolC3t14396H Brassica oleracea HOM05D000353 ORTHO05D000174 6.1e-06 55.5 142 28.2


User provided reference genes

Program Settings