Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24596 Brassica carinata HOM05D011341 ORTHO05D012801 5.0e-34 147.1 71 100.0
A02p16700 Brassica napus HOM05D011341 ORTHO05D042382 1.7e-21 105.5 70 75.7
BraA02t06725Z Brassica rapa HOM05D011341 ORTHO05D042382 1.7e-21 105.5 70 75.7
BcaC03g15210 Brassica carinata HOM05D011341 ORTHO05D012801 8.3e-21 103.2 77 72.7
BcaC03g15209 Brassica carinata HOM05D011341 ORTHO05D012801 6.0e-19 97.1 70 71.4
C02p27970 Brassica napus HOM05D011341 ORTHO05D012801 6.0e-19 97.1 70 71.4
BolC2t08840H Brassica oleracea HOM05D011341 ORTHO05D012801 6.0e-19 97.1 70 71.4
Sp5g25740 Schrenkiella parvula HOM05D011341 ORTHO05D012801 2.1e-16 88.6 70 67.1
A07p37010 Brassica napus HOM05D011341 ORTHO05D012801 9.9e-14 79.7 70 61.4
BraA07t31264Z Brassica rapa HOM05D011341 ORTHO05D012801 9.9e-14 79.7 70 61.4
C06p44580 Brassica napus HOM05D011341 ORTHO05D012801 3.2e-12 74.7 71 56.3
BcaC08g46508 Brassica carinata HOM05D011341 ORTHO05D012801 5.4e-12 73.9 71 56.3
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 1.2e-11 72.8 51 68.6
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 1.2e-11 72.8 51 68.6
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 6.0e-11 70.5 51 66.7
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 6.0e-11 70.5 51 66.7
CARHR063800 Cardamine hirsuta HOM05D011341 ORTHO05D012801 1.3e-10 69.3 63 57.1
BcaB03g14824 Brassica carinata HOM05D011341 ORTHO05D012801 3.0e-10 68.2 71 52.1
BolC6t39522H Brassica oleracea HOM05D011341 ORTHO05D012801 1.1e-09 66.2 49 65.3
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 3.1e-07 58.2 49 55.1
AL2G30000 Arabidopsis lyrata HOM05D011341 ORTHO05D012801 5.2e-07 57.4 65 49.2
Carub.0002s1731 Capsella rubella HOM05D011341 ORTHO05D012801 1.5e-06 55.8 58 51.7
BcaC03g15211 Brassica carinata HOM05D016736 ORTHO05D019958 2.0e-06 55.5 73 45.2
C02p27980 Brassica napus HOM05D016736 ORTHO05D019958 9.9e-06 53.1 64 48.4
BolC2t08841H Brassica oleracea HOM05D016736 ORTHO05D019958 9.9e-06 53.1 64 48.4


User provided reference genes

Program Settings