Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24564 Brassica carinata HOM05D006637 ORTHO05D001736 5.1e-73 277.7 146 100.0
BcaB05g24843 Brassica carinata HOM05D006637 ORTHO05D001736 1.6e-39 166.4 126 77.8
BcaC03g15494 Brassica carinata HOM05D006637 ORTHO05D001736 1.9e-35 152.9 130 72.3
A02p19190 Brassica napus HOM05D006637 ORTHO05D001736 1.9e-35 152.9 130 72.3
BcaC03g15490 Brassica carinata HOM05D006637 ORTHO05D001736 2.5e-35 152.5 127 73.2
BolC2t09205H Brassica oleracea HOM05D006637 ORTHO05D001736 1.4e-33 146.7 133 69.2
C02p31780 Brassica napus HOM05D006637 ORTHO05D001736 3.0e-33 145.6 130 69.2
BcaC08g45599 Brassica carinata HOM05D006637 ORTHO05D001736 5.1e-33 144.8 141 66.7
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 5.1e-33 144.8 141 66.7
BolC6t38463H Brassica oleracea HOM05D006637 ORTHO05D001736 5.1e-33 144.8 141 66.7
Sp5g29400 Schrenkiella parvula HOM05D006637 ORTHO05D001736 2.5e-32 142.5 162 60.5
A07p29500 Brassica napus HOM05D000311 ORTHO05D000183 5.7e-32 141.4 142 66.9
BraA07t30588Z Brassica rapa HOM05D006637 ORTHO05D001736 5.7e-32 141.4 142 66.9
Thhalv10018880m.g Eutrema salsugineum HOM05D006637 ORTHO05D001736 2.9e-28 129.0 164 56.1
AL2G34100 Arabidopsis lyrata HOM05D006637 ORTHO05D001736 2.5e-27 125.9 175 53.7
Carub.0002s2101 Capsella rubella HOM05D006637 ORTHO05D001736 2.5e-27 125.9 140 61.4
BraA02t06967Z Brassica rapa HOM05D006637 ORTHO05D001736 4.4e-24 115.2 126 61.9
CARHR067480 Cardamine hirsuta HOM05D006637 ORTHO05D001736 9.7e-24 114.0 155 52.9
AT1G74220 Arabidopsis thaliana HOM05D006637 ORTHO05D001736 7.7e-21 104.4 173 47.4
C06p48410 Brassica napus HOM05D006637 ORTHO05D001736 4.2e-19 98.6 133 51.9
A07p40060 Brassica napus HOM05D006637 ORTHO05D001736 9.4e-19 97.4 131 51.9
BolC6t39870H Brassica oleracea HOM05D006637 ORTHO05D001736 9.4e-19 97.4 132 51.5
BraA07t31550Z Brassica rapa HOM05D006637 ORTHO05D001736 9.4e-19 97.4 131 51.9
BcaC08g46854 Brassica carinata HOM05D006637 ORTHO05D001736 6.3e-15 84.7 86 61.6
Aa31LG4G4510 Aethionema arabicum HOM05D006637 ORTHO05D001736 1.8e-14 83.2 84 63.1
THA.LOC104808038 Tarenaya hassleriana HOM05D006637 ORTHO05D001736 2.5e-11 72.8 110 50.9
PSO017G7320 Papaver somniferum HOM05D006637 ORTHO05D001736 1.4e-06 57.0 88 44.3
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 1.8e-06 56.6 106 45.3
Potri.012G061700 Populus trichocarpa HOM05D006637 ORTHO05D001736 1.8e-06 56.6 85 49.4
Actinidia04823 Actinidia chinensis HOM05D006637 ORTHO05D001736 2.4e-06 56.2 81 51.9
PSO478G0913 Papaver somniferum HOM05D006637 ORTHO05D001736 2.4e-06 56.2 88 44.3
Ciclev10023416m.g Citrus clementina HOM05D006637 ORTHO05D001736 3.1e-06 55.8 70 55.7
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 4.1e-06 55.5 118 39.8
Glyma.05G020700 Glycine max HOM05D006637 ORTHO05D001736 4.1e-06 55.5 82 47.6
MELO3C017227.2 Cucumis melo HOM05D006637 ORTHO05D001736 5.3e-06 55.1 101 46.5
RcHm_v2.0_Chr7g0183151 Rosa chinensis HOM05D006637 ORTHO05D001736 5.3e-06 55.1 69 53.6
Ciclev10033684m.g Citrus clementina HOM05D003787 ORTHO05D001736 9.1e-06 54.3 69 52.2
Glyma.17G078600 Glycine max HOM05D006637 ORTHO05D001736 9.1e-06 54.3 69 52.2
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 9.1e-06 54.3 73 52.1
MD14G1212300 Malus domestica HOM05D006637 ORTHO05D001736 9.1e-06 54.3 122 41.0
Phvul.003G184500 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 9.1e-06 54.3 80 50.0
PGR083G0945 Punica granatum HOM05D006637 ORTHO05D001736 9.1e-06 54.3 120 41.7


User provided reference genes

Program Settings