Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24530 Brassica carinata HOM05D000305 ORTHO05D093680 2.5e-68 262.3 163 100.0
BcaNung02728 Brassica carinata HOM05D001056 ORTHO05D000902 4.9e-08 62.0 60 58.3
BcaC02g10680 Brassica carinata HOM05D000305 ORTHO05D000065 8.3e-08 61.2 60 61.7
BcaC09g51522 Brassica carinata HOM05D000305 ORTHO05D000065 8.3e-08 61.2 60 60.0
C04p26600 Brassica napus HOM05D000305 ORTHO05D000065 8.3e-08 61.2 60 61.7
BolC4t24144H Brassica oleracea HOM05D000305 ORTHO05D000065 8.3e-08 61.2 60 61.7
BcaC05g26607 Brassica carinata HOM05D001056 ORTHO05D000902 1.1e-07 60.8 60 58.3
A03p51660 Brassica napus HOM05D000305 ORTHO05D000065 1.1e-07 60.8 60 58.3
C05p26560 Brassica napus HOM05D001056 ORTHO05D000902 1.1e-07 60.8 60 58.3
BolC7t46294H Brassica oleracea HOM05D001056 ORTHO05D000902 1.1e-07 60.8 60 58.3
BraA03t11643Z Brassica rapa HOM05D000305 ORTHO05D000065 1.1e-07 60.8 60 58.3
A02p21510 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-07 60.5 60 60.0
C05p51350 Brassica napus HOM05D000305 ORTHO05D000065 4.1e-07 58.9 60 60.0
BraA02t07173Z Brassica rapa HOM05D000305 ORTHO05D000065 4.1e-07 58.9 60 58.3
BcaC04g18867 Brassica carinata HOM05D000305 ORTHO05D000065 5.4e-07 58.5 51 62.7
C09p33420 Brassica napus HOM05D001056 ORTHO05D000902 5.4e-07 58.5 60 58.3
C09p53510 Brassica napus HOM05D000305 ORTHO05D000065 5.4e-07 58.5 60 60.0
BolC9t56179H Brassica oleracea HOM05D001056 ORTHO05D000902 5.4e-07 58.5 60 58.3
BolC9t58227H Brassica oleracea HOM05D000305 ORTHO05D000065 5.4e-07 58.5 60 60.0
A08p10510 Brassica napus HOM05D000305 ORTHO05D000065 7.1e-07 58.2 60 58.3
C05p26130 Brassica napus HOM05D001056 ORTHO05D000902 7.1e-07 58.2 60 55.0
BraA08t33050Z Brassica rapa HOM05D000305 ORTHO05D000065 7.1e-07 58.2 60 58.3
BcaC01g06254 Brassica carinata HOM05D000305 ORTHO05D000065 9.2e-07 57.8 51 62.7
BcaC06g33734 Brassica carinata HOM05D000305 ORTHO05D000065 9.2e-07 57.8 60 56.7
BraA07t30895Z Brassica rapa HOM05D001056 ORTHO05D000902 9.2e-07 57.8 60 56.7
BcaC02g12385 Brassica carinata HOM05D000305 ORTHO05D000065 1.2e-06 57.4 60 60.0
C03p74110 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-06 57.4 60 61.7
A01p22430 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-06 56.6 51 62.7
A03p11520 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-06 56.6 51 62.7
C04p32140 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-06 56.6 51 62.7
C09p66580 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-06 56.6 51 62.7
BraA10t43655Z Brassica rapa HOM05D000305 ORTHO05D000065 2.1e-06 56.6 51 62.7
BcaC09g50144 Brassica carinata HOM05D000305 ORTHO05D000065 4.6e-06 55.5 60 58.3
C01p28470 Brassica napus HOM05D000305 ORTHO05D000065 4.6e-06 55.5 60 58.3
BolC1t02780H Brassica oleracea HOM05D000305 ORTHO05D000065 4.6e-06 55.5 60 58.3
BraA09t39464Z Brassica rapa HOM05D000305 ORTHO05D028083 4.6e-06 55.5 63 55.6
A08p17390 Brassica napus HOM05D000305 ORTHO05D000065 7.8e-06 54.7 50 62.0
A08p17420 Brassica napus HOM05D000305 ORTHO05D000065 7.8e-06 54.7 50 62.0
BraA08t33699Z Brassica rapa HOM05D000305 ORTHO05D000065 7.8e-06 54.7 50 62.0


User provided reference genes

Program Settings