Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-96 356.7 175 100.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 3.4e-92 341.7 168 99.4
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 8.8e-80 300.4 174 87.9
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 5.3e-77 291.2 166 89.2
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 3.8e-75 285.0 175 85.7
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 3.8e-75 285.0 175 85.7
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-74 282.3 175 85.1
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 2.5e-74 282.3 175 85.1
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.2e-58 227.6 174 68.4
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 2.2e-54 216.1 161 68.9
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.1e-53 212.2 157 66.2
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 7.0e-53 211.1 159 66.0
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 6.5e-51 204.5 168 63.1
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 6.5e-51 204.5 159 64.2
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 3.2e-50 202.2 175 66.9
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 5.5e-50 201.4 178 59.6
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 5.5e-50 201.4 178 59.6
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.4e-50 200.7 162 63.0
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-49 198.4 168 59.5
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 4.7e-49 198.4 168 59.5
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-48 197.2 159 62.3
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-48 196.8 157 63.1
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-48 196.1 159 62.3
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 8.8e-48 194.1 149 63.1
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-47 193.4 159 61.0
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 4.4e-47 191.8 149 63.1
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-43 180.6 141 61.7
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.9e-42 176.4 151 60.3
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 1.2e-41 173.7 153 57.5
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.9e-40 167.5 122 63.9
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 4.4e-39 165.2 151 58.9
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-38 163.7 145 54.5
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-36 156.0 139 61.2
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.3e-35 152.9 149 53.0
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-35 152.5 165 49.1
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 5.0e-35 151.8 149 53.7
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.3e-34 149.1 140 55.0
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 6.2e-33 144.8 175 45.7
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.0e-33 144.4 149 51.7
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-32 142.5 175 45.7
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 3.1e-32 142.5 175 45.7
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.0e-32 142.1 151 51.0
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-31 140.6 157 49.0
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.6e-31 139.4 149 49.7
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 7.5e-31 137.9 141 49.6
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 7.5e-31 137.9 110 60.9
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 7.5e-31 137.9 120 57.5
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.3e-30 137.1 151 49.0
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 2.2e-30 136.3 161 48.4
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-30 135.2 161 48.4
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 4.9e-30 135.2 161 48.4
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 1.9e-29 133.3 161 47.8
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-29 132.9 107 62.6
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.4e-29 131.7 118 58.5
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 1.6e-28 130.2 161 47.2
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.0e-28 129.8 132 50.0
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 4.6e-28 128.6 143 47.6
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 5.0e-27 125.2 159 48.4
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 6.6e-27 124.8 142 47.2
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 6.6e-27 124.8 142 47.2
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 6.6e-27 124.8 141 46.8
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.6e-25 119.0 141 48.2
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 4.7e-25 118.6 94 62.8
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 7.5e-23 111.3 146 39.7
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 9.8e-23 110.9 103 59.2
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 8.3e-22 107.8 164 39.6
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-21 106.3 73 71.2
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 1.6e-20 103.6 166 36.1
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-20 101.3 106 51.9
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 3.9e-19 99.0 111 45.0
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.6e-15 86.3 83 53.0
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 7.1e-13 78.2 109 39.4
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.2e-13 77.8 85 47.1
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 1.2e-12 77.4 79 54.4
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 6.0e-12 75.1 69 56.5
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-09 66.2 58 50.0
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 6.2e-09 65.1 55 58.2
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 7.6e-07 58.2 54 48.1
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 1.3e-06 57.4 53 56.6


User provided reference genes

Program Settings