Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 7.2e-95 350.5 171 100.0
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-89 331.6 162 100.0
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 2.3e-80 302.4 174 87.9
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-79 298.9 167 89.2
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-78 294.7 170 86.5
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 4.7e-78 294.7 170 86.5
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-77 293.1 170 85.9
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 1.4e-77 293.1 170 85.9
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.8e-62 242.3 171 70.2
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 6.6e-56 221.1 168 69.0
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 3.3e-55 218.8 158 66.5
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.3e-55 218.4 156 66.0
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.6e-54 216.5 162 67.9
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-54 215.7 176 59.7
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 2.8e-54 215.7 176 59.7
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 6.2e-54 214.5 170 68.8
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 8.1e-54 214.2 158 65.2
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 2.0e-52 209.5 169 60.9
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 2.6e-52 209.1 158 63.9
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 4.4e-52 208.4 172 58.1
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 4.4e-52 208.4 164 61.0
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 4.4e-52 208.4 172 58.1
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.9e-52 207.2 159 64.2
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 2.2e-51 206.1 171 59.1
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-50 203.4 165 60.6
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-50 202.6 146 66.4
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 9.6e-47 190.7 149 61.7
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-45 186.0 149 63.1
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 1.3e-43 180.3 154 57.8
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.7e-40 169.9 152 58.6
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.0e-40 169.1 122 64.8
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.5e-39 166.0 153 52.3
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.8e-38 161.8 153 52.9
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 4.8e-38 161.8 168 49.4
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 2.0e-36 156.4 165 50.9
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.0e-36 156.4 140 55.7
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.6e-36 156.0 138 60.9
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.8e-35 152.1 158 51.3
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.1e-34 150.6 158 50.0
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.4e-34 149.4 165 48.5
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 3.2e-34 149.1 118 60.2
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 4.2e-34 148.7 166 48.8
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 5.4e-34 148.3 114 62.3
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-33 147.1 165 48.5
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-33 147.1 165 48.5
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.6e-33 145.2 153 49.7
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 6.0e-33 144.8 149 47.7
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 6.6e-32 141.4 153 47.1
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-31 140.2 169 47.3
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.9e-31 139.8 134 50.7
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 2.5e-31 139.4 105 63.8
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 3.3e-31 139.0 169 47.3
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 3.3e-31 139.0 169 47.3
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-30 136.0 169 46.2
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-29 132.9 169 45.6
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 6.9e-29 131.3 153 45.8
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-28 130.6 158 49.4
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.6e-28 129.4 122 55.7
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 4.5e-28 128.6 150 46.0
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 4.5e-28 128.6 150 46.0
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 4.5e-28 128.6 141 46.1
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 7.6e-28 127.9 141 49.6
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 3.5e-25 119.0 94 63.8
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 6.7e-24 114.8 168 36.3
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-23 113.6 154 42.9
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 2.1e-22 109.8 103 58.3
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 8.1e-22 107.8 160 38.1
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-21 107.1 71 71.8
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-21 107.1 120 45.8
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 7.6e-20 101.3 106 50.9
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.6e-17 92.0 91 54.9
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 3.3e-15 85.9 114 40.4
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.6e-15 84.3 87 48.3
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 1.4e-13 80.5 91 50.5
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 2.4e-13 79.7 104 46.2
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-10 69.7 58 51.7
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.5e-09 65.9 58 51.7
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 3.9e-08 62.4 54 53.7
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-07 60.5 52 55.8


User provided reference genes

Program Settings