Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 3.3e-39 164.5 77 100.0
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 1.2e-33 146.0 78 85.9
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 1.6e-33 145.6 78 87.2
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 4.6e-33 144.1 78 85.9
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 4.6e-33 144.1 78 85.9
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 6.0e-33 143.7 78 84.6
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 6.0e-33 143.7 78 84.6
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 7.9e-33 143.3 78 84.6
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 7.9e-33 143.3 78 84.6
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 1.0e-32 142.9 78 82.1
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 1.0e-32 142.9 78 84.6
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 1.0e-32 142.9 78 84.6
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 2.3e-32 141.7 78 84.6
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 2.3e-32 141.7 78 83.3
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 2.3e-32 141.7 78 83.3
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 2.3e-32 141.7 78 83.3
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 6.7e-32 140.2 79 79.7
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 8.7e-32 139.8 78 80.8
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 1.9e-31 138.7 78 82.1
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 3.2e-18 94.7 74 63.5
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 3.2e-18 94.7 77 59.7
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 3.2e-18 94.7 77 59.7
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 3.2e-18 94.7 77 59.7
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 4.2e-18 94.4 77 58.4
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 4.2e-18 94.4 77 58.4
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 5.5e-18 94.0 77 59.7
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 5.5e-18 94.0 77 58.4
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 5.5e-18 94.0 77 59.7
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 5.5e-18 94.0 77 58.4
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 7.2e-18 93.6 78 57.7
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 1.2e-17 92.8 77 59.7
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 9.7e-15 83.2 74 55.4
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 2.8e-14 81.6 77 54.5
BolC5t34889H Brassica oleracea HOM05D008295 ORTHO05D010471 4.1e-13 77.8 55 56.4
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 7.7e-12 73.6 72 43.1
AT3G04943 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 2.9e-11 71.6 79 49.4
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 5.0e-11 70.9 78 48.7
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 8.5e-11 70.1 69 44.9
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.1e-10 69.7 82 43.9
AT3G23165 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.4e-10 69.3 75 48.0
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 1.4e-10 69.3 71 50.7
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 1.9e-10 68.9 69 40.6
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 2.5e-10 68.6 75 46.7
AL3G15270 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 3.2e-10 68.2 78 48.7
AL3G37780 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.5e-10 67.4 77 46.8
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 1.2e-09 66.2 71 40.8
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 2.1e-09 65.5 75 37.3
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 4.6e-09 64.3 77 41.6
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 1.8e-08 62.4 81 40.7
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 1.8e-08 62.4 50 50.0
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 2.3e-08 62.0 66 43.9
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 3.0e-08 61.6 75 40.0
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 5.1e-08 60.8 75 40.0
Carub.0003s2338 Capsella rubella HOM05D008295 ORTHO05D010471 6.7e-08 60.5 77 40.3
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 6.7e-08 60.5 71 42.3
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 1.5e-07 59.3 61 39.3
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 2.6e-07 58.5 73 38.4
AT2G14935 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.3e-06 56.2 56 42.9


User provided reference genes

Program Settings