Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 1.0e-54 216.5 108 100.0
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-45 184.1 100 94.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-41 172.6 100 88.0
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-41 171.0 100 86.0
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-40 169.1 100 86.0
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 3.2e-40 168.3 103 85.4
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.2e-39 166.4 100 85.0
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-39 165.6 100 83.0
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 3.5e-39 164.9 99 80.8
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-39 164.1 100 83.0
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 1.8e-38 162.5 100 82.0
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 5.1e-38 161.0 100 82.0
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 2.5e-37 158.7 98 83.7
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-35 152.1 93 82.8
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 4.1e-35 151.4 100 77.0
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-30 136.7 100 67.0
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-29 132.9 99 65.7
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 2.5e-29 132.1 100 65.0
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-28 129.0 100 64.0
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 2.2e-28 129.0 101 64.4
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-28 128.3 100 64.0
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 6.3e-28 127.5 101 62.4
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 6.3e-28 127.5 101 63.4
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 6.3e-28 127.5 101 63.4
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 1.4e-27 126.3 101 62.4
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 1.4e-27 126.3 101 62.4
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 1.8e-27 125.9 101 62.4
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 2.4e-27 125.6 100 64.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 3.1e-27 125.2 101 62.4
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 3.1e-27 125.2 101 61.4
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-27 125.2 100 62.0
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 4.1e-27 124.8 101 61.4
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 4.1e-27 124.8 101 61.4
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 4.1e-27 124.8 99 62.6
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 4.1e-27 124.8 99 62.6
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 6.9e-27 124.0 100 62.0
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 6.9e-27 124.0 100 62.0
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 6.9e-27 124.0 100 63.0
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 9.1e-27 123.6 100 62.0
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 1.2e-26 123.2 99 63.6
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 1.2e-26 123.2 99 62.6
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-26 123.2 99 62.6
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-26 123.2 99 62.6
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-26 122.9 101 60.4
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-26 122.9 99 62.6
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-26 122.9 103 62.1
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-26 122.5 99 61.6
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-26 121.7 100 60.0
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-26 121.7 100 61.0
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 100 61.0
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 3.4e-26 121.7 100 61.0
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 3.4e-26 121.7 99 61.6
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 4.5e-26 121.3 94 63.8
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 60.0
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-26 121.3 100 62.0
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 5.9e-26 120.9 100 61.0
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 5.9e-26 120.9 100 62.0
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 5.9e-26 120.9 100 62.0
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 7.7e-26 120.6 99 61.6
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 7.7e-26 120.6 99 61.6
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 7.7e-26 120.6 99 61.6
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.2 96 62.5
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.2 96 62.5
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.2 96 62.5
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.2 96 62.5
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.2 99 61.6
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-25 120.2 99 60.6
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-25 120.2 100 59.0
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-25 119.8 101 58.4
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 1.3e-25 119.8 99 60.6
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 1.3e-25 119.8 100 61.0
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-25 119.4 99 60.6
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-25 119.4 100 60.0
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-25 119.0 100 61.0
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-25 119.0 99 60.6
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-25 119.0 100 59.0
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-25 119.0 99 59.6
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 2.2e-25 119.0 100 60.0
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 2.9e-25 118.6 99 59.6
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 2.9e-25 118.6 99 59.6
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 2.9e-25 118.6 99 60.6
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 2.9e-25 118.6 99 59.6
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 3.8e-25 118.2 99 60.6
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 5.0e-25 117.9 100 57.0
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 5.0e-25 117.9 99 59.6
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 5.0e-25 117.9 98 60.2
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 5.0e-25 117.9 99 59.6
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 6.5e-25 117.5 100 60.0
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-25 117.5 100 60.0
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-25 117.5 100 58.0
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 6.5e-25 117.5 100 60.0
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 1.1e-24 116.7 100 60.0
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-24 116.7 99 59.6
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-24 116.7 100 59.0
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-24 116.7 100 60.0
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-24 116.3 99 61.6
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-24 115.9 100 60.0
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-24 115.9 92 64.1
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 3.2e-24 115.2 101 54.5
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 4.2e-24 114.8 97 56.7
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 4.2e-24 114.8 99 59.6
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 4.2e-24 114.8 99 59.6
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 7.2e-24 114.0 105 58.1
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 7.2e-24 114.0 99 60.6
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 7.2e-24 114.0 99 60.6
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 1.6e-23 112.8 91 61.5
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 3.6e-23 111.7 94 58.5
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-22 110.2 99 59.6
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-22 109.8 100 54.0
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-22 109.4 99 57.6
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 1.5e-21 106.3 95 57.9
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-20 102.8 98 51.0
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 8.2e-20 100.5 95 55.8
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-19 100.1 83 59.0
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-19 99.0 75 65.3
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 2.4e-19 99.0 79 62.0
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 2.4e-19 99.0 96 55.2
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 2.4e-19 99.0 79 62.0
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.0e-17 93.6 83 66.3
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-17 93.2 100 52.0
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-17 90.9 84 56.0
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-16 90.1 100 51.0
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 4.2e-16 88.2 70 61.4
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 9.4e-16 87.0 74 56.8
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-15 86.7 75 54.7
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-15 86.3 69 63.8
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-15 86.3 93 51.6
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 6.1e-15 84.3 77 58.4
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 6.1e-15 84.3 71 63.4
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-15 84.0 99 48.5
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-15 84.0 99 48.5
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-15 84.0 100 48.0
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-14 83.2 66 63.6
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 3.0e-14 82.0 70 60.0
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-14 81.6 77 57.1
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-14 80.9 100 47.0
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-13 80.1 74 60.8
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 3.3e-13 78.6 68 57.4
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 3.3e-13 78.6 66 62.1
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-13 77.0 67 59.7
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 9.7e-13 77.0 67 59.7
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 2.2e-12 75.9 65 56.9
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-12 75.9 69 56.5
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 1.1e-11 73.6 61 60.7
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 1.8e-11 72.8 83 53.0
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 1.2e-10 70.1 55 61.8
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-10 70.1 99 39.4
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-10 68.9 53 62.3
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 2.6e-10 68.9 48 68.8
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 3.5e-10 68.6 46 67.4
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.5e-10 68.6 48 68.8
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.5e-10 68.6 48 68.8
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 3.5e-10 68.6 48 68.8
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 1.3e-09 66.6 48 66.7
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 1.3e-09 66.6 48 66.7
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 1.7e-09 66.2 56 58.9
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 2.2e-09 65.9 67 49.3
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 2.9e-09 65.5 61 57.4
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 3.8e-09 65.1 48 64.6
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 3.8e-09 65.1 48 64.6
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 5.0e-09 64.7 47 66.0
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 7.2e-08 60.8 95 38.9
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 7.2e-08 60.8 60 50.0
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-07 58.9 95 37.9
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-07 58.9 95 37.9
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-07 58.9 95 37.9
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 3.6e-07 58.5 74 40.5
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 6.1e-07 57.8 95 36.8
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-06 56.6 45 60.0
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 1.8e-06 56.2 95 34.7
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 2.3e-06 55.8 71 49.3
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 6.7e-06 54.3 90 37.8


User provided reference genes

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