Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24361 Brassica carinata HOM05D000792 ORTHO05D001021 3.9e-36 154.5 87 100.0
BcaB05g23043 Brassica carinata HOM05D000792 ORTHO05D001021 7.8e-21 103.6 93 61.3
BcaB05g23041 Brassica carinata HOM05D000792 ORTHO05D001021 9.5e-19 96.7 93 58.1
BcaC06g35738 Brassica carinata HOM05D000792 ORTHO05D014974 2.1e-18 95.5 98 58.2
BcaB02g07909 Brassica carinata HOM05D000792 ORTHO05D001021 3.2e-14 81.6 46 82.6
BcaB02g07907 Brassica carinata HOM05D000792 ORTHO05D001021 4.2e-14 81.3 47 80.9
BcaC08g44509 Brassica carinata HOM05D000792 ORTHO05D001021 7.1e-14 80.5 46 82.6
A07p20690 Brassica napus HOM05D000792 ORTHO05D001021 7.1e-14 80.5 46 82.6
C06p19610 Brassica napus HOM05D000792 ORTHO05D001021 7.1e-14 80.5 46 82.6
BolC6t37154H Brassica oleracea HOM05D000792 ORTHO05D001021 7.1e-14 80.5 46 82.6
BraA07t29760Z Brassica rapa HOM05D000792 ORTHO05D001021 7.1e-14 80.5 46 82.6
BcaC02g08983 Brassica carinata HOM05D000792 ORTHO05D001021 2.7e-13 78.6 50 78.0
BcaC07g37427 Brassica carinata HOM05D000792 ORTHO05D001021 2.7e-13 78.6 46 80.4
BolC8t47750H Brassica oleracea HOM05D000792 ORTHO05D001021 2.7e-13 78.6 46 80.4
A08p07340 Brassica napus HOM05D000792 ORTHO05D001021 3.5e-13 78.2 46 80.4
BraA08t32748Z Brassica rapa HOM05D000792 ORTHO05D001021 3.5e-13 78.2 46 80.4
BcaB04g17738 Brassica carinata HOM05D000792 ORTHO05D001021 6.0e-13 77.4 46 80.4
C08p09040 Brassica napus HOM05D000792 ORTHO05D001021 7.8e-13 77.0 46 78.3
Thhalv10027670m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 3.9e-12 74.7 46 76.1
C04p48200 Brassica napus HOM05D000792 ORTHO05D001021 6.6e-12 73.9 46 78.3
BolC4t26412H Brassica oleracea HOM05D000792 ORTHO05D001021 6.6e-12 73.9 46 78.3
Carub.0007s3434 Capsella rubella HOM05D000792 ORTHO05D001021 2.5e-11 72.0 46 71.7
BolC7t41623H Brassica oleracea HOM05D000792 ORTHO05D014974 4.3e-11 71.2 36 88.9
BraA04t17077Z Brassica rapa HOM05D000792 ORTHO05D001021 7.3e-11 70.5 46 76.1
BcaB06g27600 Brassica carinata HOM05D000792 ORTHO05D001021 1.3e-10 69.7 46 76.1
Sp7g00770 Schrenkiella parvula HOM05D000792 ORTHO05D001021 1.3e-10 69.7 46 73.9
A04p14170 Brassica napus HOM05D000792 ORTHO05D001021 1.6e-10 69.3 46 73.9
AL7G48430 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.1e-10 68.9 45 75.6
AT5G41120 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 2.1e-10 68.9 45 75.6
AT5G41130 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 6.2e-10 67.4 46 69.6
Carub.0007s3437 Capsella rubella HOM05D000792 ORTHO05D001021 6.2e-10 67.4 45 77.8
A03p68270 Brassica napus HOM05D000792 ORTHO05D014974 3.1e-09 65.1 35 82.9
BraA01t02641Z Brassica rapa HOM05D000792 ORTHO05D014974 3.1e-09 65.1 35 82.9
AL7G48380 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 4.0e-09 64.7 46 69.6
CARHR213240 Cardamine hirsuta HOM05D000792 ORTHO05D001021 2.0e-08 62.4 46 67.4
Aa31LG9G710 Aethionema arabicum HOM05D000792 ORTHO05D001021 5.8e-08 60.8 46 60.9
Cpa.g.sc70.97 Carica papaya HOM05D000792 ORTHO05D001021 1.7e-07 59.3 46 58.7
CsaV3_3G026480 Cucumis sativus L. HOM05D000792 ORTHO05D001021 1.7e-07 59.3 46 65.2
C07p11470 Brassica napus HOM05D000792 ORTHO05D014974 2.2e-07 58.9 77 44.2
CARHR213250 Cardamine hirsuta HOM05D000792 ORTHO05D001021 3.8e-07 58.2 46 63.0
Sabra16G0206900 Salix brachista HOM05D000792 ORTHO05D001021 3.8e-07 58.2 46 60.9
BcaC06g31041 Brassica carinata HOM05D000792 ORTHO05D001021 4.9e-07 57.8 45 60.0
Gohir.D11G066600 Gossypium hirsutum HOM05D000792 ORTHO05D001021 4.9e-07 57.8 52 53.8
Gorai.007G072100 Gossypium raimondii HOM05D000792 ORTHO05D001021 4.9e-07 57.8 52 53.8
QL02p070287 Quercus lobata HOM05D000792 ORTHO05D001021 4.9e-07 57.8 46 63.0
Thhalv10003736m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 6.4e-07 57.4 46 56.5
COL.COLO4_13325 Corchorus olitorius HOM05D000792 ORTHO05D001021 8.4e-07 57.0 52 51.9
ClCG05G013970 Citrullus lanatus HOM05D000792 ORTHO05D001021 1.1e-06 56.6 46 63.0
MELO3C014937.2 Cucumis melo HOM05D000792 ORTHO05D001021 1.1e-06 56.6 46 63.0
Potri.001G324200 Populus trichocarpa HOM05D000792 ORTHO05D001021 1.1e-06 56.6 46 56.5
QL02p070235 Quercus lobata HOM05D000792 ORTHO05D001021 1.1e-06 56.6 46 60.9
CiPaw.03G003800 Carya illinoinensis HOM05D000792 ORTHO05D001021 1.4e-06 56.2 46 60.9
A06p41720 Brassica napus HOM05D000792 ORTHO05D001021 1.9e-06 55.8 45 57.8
BraA06t27092Z Brassica rapa HOM05D000792 ORTHO05D001021 1.9e-06 55.8 45 57.8
Potri.001G324400 Populus trichocarpa HOM05D000792 ORTHO05D001021 2.4e-06 55.5 46 56.5
C02p53390 Brassica napus HOM05D000792 ORTHO05D001021 3.2e-06 55.1 45 55.6
BolC7t44106H Brassica oleracea HOM05D000792 ORTHO05D001021 3.2e-06 55.1 45 55.6
Cfa007185 Carpinus fangiana HOM05D000792 ORTHO05D001021 3.2e-06 55.1 46 56.5
Duzib147G1053 Durio zibethinus HOM05D000792 ORTHO05D001021 3.2e-06 55.1 52 51.9
GSVIVG01033025001 Vitis vinifera HOM05D000792 ORTHO05D001021 3.2e-06 55.1 46 54.3
BcaC06g33886 Brassica carinata HOM05D000792 ORTHO05D001021 4.2e-06 54.7 45 55.6
C07p35900 Brassica napus HOM05D000792 ORTHO05D001021 4.2e-06 54.7 45 55.6
Phvul.001G087700 Phaseolus vulgaris HOM05D000792 ORTHO05D001021 4.2e-06 54.7 46 60.9
Sc03g0004810 Simmondsia chinensis HOM05D000792 ORTHO05D001021 4.2e-06 54.7 46 58.7
AL5G15800 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 5.4e-06 54.3 46 58.7
Gohir.A11G063000 Gossypium hirsutum HOM05D000792 ORTHO05D001021 5.4e-06 54.3 52 51.9
Sabra16G0206800 Salix brachista HOM05D000792 ORTHO05D001021 5.4e-06 54.3 46 54.3
Carub.0005s0494 Capsella rubella HOM05D000792 ORTHO05D001021 7.1e-06 53.9 46 56.5
Psat3g095760 Pisum sativum HOM05D000792 ORTHO05D001021 7.1e-06 53.9 46 58.7
Thecc.04G043400 Theobroma cacao HOM05D000792 ORTHO05D001021 7.1e-06 53.9 52 50.0
BcaC03g17396 Brassica carinata HOM05D000792 ORTHO05D001021 9.3e-06 53.5 55 47.3
C02p53400 Brassica napus HOM05D000792 ORTHO05D001021 9.3e-06 53.5 55 47.3
Gohir.A11G062900 Gossypium hirsutum HOM05D000792 ORTHO05D001021 9.3e-06 53.5 52 51.9
Sp2g15980 Schrenkiella parvula HOM05D000792 ORTHO05D001021 9.3e-06 53.5 45 55.6
THA.LOC104823992 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 9.3e-06 53.5 46 56.5
Thecc.04G043500 Theobroma cacao HOM05D000792 ORTHO05D001021 9.3e-06 53.5 52 51.9
TPR.G21116 Trifolium pratense HOM05D000792 ORTHO05D001021 9.3e-06 53.5 46 58.7


User provided reference genes

Program Settings