Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24322 Brassica carinata HOM05D009658 ORTHO05D011755 2.0e-99 365.9 206 100.0
BcaC03g14887 Brassica carinata HOM05D009658 ORTHO05D011755 5.5e-73 278.1 216 77.3
BraA02t06525Z Brassica rapa HOM05D009658 ORTHO05D011755 3.6e-72 275.4 216 75.5
BolC2t08491H Brassica oleracea HOM05D009658 ORTHO05D011755 4.6e-72 275.0 216 76.9
C02p23610 Brassica napus HOM05D009658 ORTHO05D011755 7.9e-72 274.2 216 76.9
A02p14550 Brassica napus HOM05D009658 ORTHO05D011755 1.5e-70 270.0 221 76.5
BcaB03g15151 Brassica carinata HOM05D009658 ORTHO05D011755 2.5e-57 226.1 226 58.0
BolC6t39219H Brassica oleracea HOM05D009658 ORTHO05D011755 7.2e-49 198.0 252 49.6
BcaC08g46213 Brassica carinata HOM05D009658 ORTHO05D011755 1.2e-48 197.2 244 51.2
C06p42060 Brassica napus HOM05D009658 ORTHO05D011755 1.2e-48 197.2 244 51.2
Thhalv10019051m.g Eutrema salsugineum HOM05D009658 ORTHO05D011755 1.2e-46 190.7 250 56.0
BraA07t31072Z Brassica rapa HOM05D009658 ORTHO05D011755 9.7e-46 187.6 220 61.4
A07p34450 Brassica napus HOM05D009658 ORTHO05D011755 4.8e-45 185.3 228 59.2
BcaB03g15381 Brassica carinata HOM05D009658 ORTHO05D011755 4.1e-44 182.2 250 50.0
BraA07t30856Z Brassica rapa HOM05D009658 ORTHO05D011755 8.8e-39 164.5 259 50.2
A07p32330 Brassica napus HOM05D009658 ORTHO05D011755 2.8e-37 159.5 275 46.5
C06p38210 Brassica napus HOM05D009658 ORTHO05D011755 6.3e-37 158.3 270 47.4
CARHR060520 Cardamine hirsuta HOM05D009658 ORTHO05D011755 1.8e-36 156.8 286 39.5
BolC6t38920H Brassica oleracea HOM05D009658 ORTHO05D011755 3.1e-36 156.0 278 46.4
Sp5g22890 Schrenkiella parvula HOM05D009658 ORTHO05D011755 5.4e-36 155.2 173 64.2
AL2G26670 Arabidopsis lyrata HOM05D009658 ORTHO05D011755 5.2e-31 138.7 137 52.6
Carub.0002s1435 Capsella rubella HOM05D009658 ORTHO05D011755 2.7e-27 126.3 189 40.2
Aa31sc473G10 Aethionema arabicum HOM05D009658 ORTHO05D011755 2.0e-22 110.2 218 38.5
BcaC08g46025 Brassica carinata HOM05D009658 ORTHO05D011755 6.0e-19 98.6 71 66.2
AT1G67870 Arabidopsis thaliana HOM05D009658 ORTHO05D011755 1.7e-18 97.1 138 47.1
Carub.0002s1436 Capsella rubella HOM05D009658 ORTHO05D011755 1.7e-18 97.1 131 55.0
BcaC08g46026 Brassica carinata HOM05D009658 ORTHO05D011755 1.8e-15 87.0 55 67.3
AL2G26650 Arabidopsis lyrata HOM05D009658 ORTHO05D011755 2.3e-15 86.7 103 50.5


User provided reference genes

Program Settings