Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24315 Brassica carinata HOM05D010929 ORTHO05D011627 7.0e-107 390.6 190 100.0
A02p14490 Brassica napus HOM05D010929 ORTHO05D011627 7.4e-32 141.4 80 82.5
BolC2t08479H Brassica oleracea HOM05D010929 ORTHO05D011627 6.3e-31 138.3 67 92.5
C02p23450 Brassica napus HOM05D010929 ORTHO05D011627 1.4e-30 137.1 80 82.5
BcaB01g01747 Brassica carinata HOM05D009886 ORTHO05D011627 3.3e-24 115.9 71 87.3
CARHR112780 Cardamine hirsuta HOM05D010929 ORTHO05D011627 6.3e-23 111.7 78 71.8
BcaB02g06456 Brassica carinata HOM05D009886 ORTHO05D011627 5.3e-22 108.6 71 81.7
CARHR149560 Cardamine hirsuta HOM05D010929 ORTHO05D011627 9.0e-22 107.8 78 69.2
BcaB06g26859 Brassica carinata HOM05D009886 ORTHO05D011627 1.2e-21 107.5 69 84.1
AL5G21680 Arabidopsis lyrata HOM05D010929 ORTHO05D011627 4.5e-21 105.5 78 66.7
AL5G21620 Arabidopsis lyrata HOM05D010929 ORTHO05D011627 1.4e-19 100.5 82 58.5
BcaB05g23825 Brassica carinata HOM05D009886 ORTHO05D011627 1.9e-19 100.1 72 81.9
C07p07650 Brassica napus HOM05D010929 ORTHO05D011627 1.9e-19 100.1 75 60.0
C07p07690 Brassica napus HOM05D010929 ORTHO05D011627 1.9e-19 100.1 75 60.0
BolC7t41186H Brassica oleracea HOM05D010929 ORTHO05D011627 1.9e-19 100.1 75 60.0
BolC7t41190H Brassica oleracea HOM05D010929 ORTHO05D011627 1.9e-19 100.1 75 60.0
A07p04790 Brassica napus HOM05D010929 ORTHO05D011627 2.5e-19 99.8 75 60.0
Carub.0005s0939 Capsella rubella HOM05D010929 ORTHO05D011627 2.5e-19 99.8 80 57.5
Carub.0005s0952 Capsella rubella HOM05D010929 ORTHO05D011627 2.5e-19 99.8 80 57.5
BcaC06g36107 Brassica carinata HOM05D010929 ORTHO05D011627 3.2e-19 99.4 165 37.0
BcaB07g32885 Brassica carinata HOM05D008116 ORTHO05D092418 2.7e-18 96.3 73 78.1
BcaNung03562 Brassica carinata HOM05D009886 ORTHO05D011627 2.5e-16 89.7 56 85.7
BcaC02g10020 Brassica carinata HOM05D002478 ORTHO05D003331 7.4e-16 88.2 71 70.4
BcaB01g05258 Brassica carinata HOM05D009886 ORTHO05D091658 9.7e-16 87.8 107 53.3
BcaC06g34265 Brassica carinata HOM05D009886 ORTHO05D011627 3.7e-15 85.9 67 70.1
BcaC09g49061 Brassica carinata HOM05D009886 ORTHO05D011627 1.4e-14 84.0 67 70.1
Sp3g29410 Schrenkiella parvula HOM05D000218 ORTHO05D000125 1.8e-14 83.6 71 53.5
BcaB05g23449 Brassica carinata HOM05D009886 ORTHO05D092337 1.2e-13 80.9 51 86.3
BcaB08g35088 Brassica carinata HOM05D009886 ORTHO05D009533 2.0e-13 80.1 67 70.1
BcaC01g01795 Brassica carinata HOM05D009886 ORTHO05D093830 3.4e-13 79.3 67 67.2
BcaC07g37585 Brassica carinata HOM05D009886 ORTHO05D092155 5.9e-13 78.6 67 62.7
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 7.7e-13 78.2 62 69.4
BcaB01g02190 Brassica carinata HOM05D009886 ORTHO05D011627 1.0e-12 77.8 69 68.1
BcaC09g49100 Brassica carinata HOM05D009886 ORTHO05D094675 1.0e-12 77.8 67 65.7
BcaC03g16790 Brassica carinata HOM05D009886 ORTHO05D095683 2.2e-12 76.6 67 59.7
BraA02t06513Z Brassica rapa HOM05D010929 ORTHO05D011627 2.2e-12 76.6 39 89.7
BcaC05g25216 Brassica carinata HOM05D009886 ORTHO05D011627 5.0e-12 75.5 49 79.6
BcaC05g27142 Brassica carinata HOM05D009886 ORTHO05D091445 8.5e-12 74.7 65 66.2
BcaB05g22085 Brassica carinata HOM05D009886 ORTHO05D094811 1.9e-11 73.6 79 60.8
BcaC06g35581 Brassica carinata HOM05D009886 ORTHO05D011627 2.5e-11 73.2 81 53.1
BcaB06g26688 Brassica carinata HOM05D009886 ORTHO05D006977 1.6e-10 70.5 71 69.0
BcaC04g20227 Brassica carinata HOM05D009886 ORTHO05D092077 2.7e-10 69.7 67 61.2
BcaNung03079 Brassica carinata HOM05D009886 ORTHO05D011627 7.9e-10 68.2 61 67.2
BcaB04g18053 Brassica carinata HOM05D009886 ORTHO05D093091 1.5e-08 63.9 68 66.2
BcaB05g23013 Brassica carinata HOM05D000471 ORTHO05D013512 2.0e-08 63.5 68 66.2
BcaB06g27413 Brassica carinata HOM05D000803 ORTHO05D011944 2.0e-08 63.5 65 63.1
Sp3g29320 Schrenkiella parvula HOM05D010929 ORTHO05D011627 9.7e-08 61.2 67 49.3


User provided reference genes

Program Settings