Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24298 Brassica carinata HOM05D005632 ORTHO05D006870 3.7e-54 214.5 102 100.0
BcaB05g24299 Brassica carinata HOM05D005632 ORTHO05D006870 1.8e-53 212.2 100 100.0
A02p14350 Brassica napus HOM05D005632 ORTHO05D006870 8.8e-48 193.4 101 95.0
BraA02t06496Z Brassica rapa HOM05D005632 ORTHO05D006870 8.8e-48 193.4 101 95.0
BcaC03g14853 Brassica carinata HOM05D005632 ORTHO05D006870 2.6e-47 191.8 101 94.1
C02p23240 Brassica napus HOM05D005632 ORTHO05D006870 2.6e-47 191.8 101 94.1
C06p42650 Brassica napus HOM05D005632 ORTHO05D006870 4.5e-44 181.0 101 89.1
BolC6t39174H Brassica oleracea HOM05D005632 ORTHO05D006870 4.5e-44 181.0 101 89.1
A07p34120 Brassica napus HOM05D005632 ORTHO05D006870 2.9e-43 178.3 102 88.2
BraA07t31038Z Brassica rapa HOM05D005632 ORTHO05D006870 2.9e-43 178.3 102 88.2
Sp5g22610 Schrenkiella parvula HOM05D005632 ORTHO05D006870 5.5e-42 174.1 104 84.6
BolC2t08463H Brassica oleracea HOM05D005632 ORTHO05D006870 3.6e-41 171.4 104 84.6
Thhalv10018804m.g Eutrema salsugineum HOM05D005632 ORTHO05D006870 7.5e-39 163.7 102 82.4
Aa31sc48G70 Aethionema arabicum HOM05D005632 ORTHO05D006870 4.5e-36 154.5 109 76.1
CARHR060170 Cardamine hirsuta HOM05D005632 ORTHO05D006870 4.2e-34 147.9 108 75.0
AT1G67590 Arabidopsis thaliana HOM05D005632 ORTHO05D006870 6.8e-32 140.6 103 74.8
Carub.0002s1393 Capsella rubella HOM05D005632 ORTHO05D006870 1.5e-31 139.4 104 74.0
AL2G26260 Arabidopsis lyrata HOM05D005632 ORTHO05D006870 2.6e-31 138.7 104 73.1
THA.LOC104807651 Tarenaya hassleriana HOM05D005632 ORTHO05D006870 1.7e-27 125.9 100 68.0
THA.LOC104825517 Tarenaya hassleriana HOM05D005632 ORTHO05D006870 1.6e-25 119.4 104 67.3
Atru.chr11.2274 Acer truncatum HOM05D005632 ORTHO05D006870 1.2e-17 93.2 100 56.0
Sabra08G0136100 Salix brachista HOM05D005632 ORTHO05D006870 1.6e-17 92.8 101 58.4
Potri.008G178300 Populus trichocarpa HOM05D005632 ORTHO05D006870 2.8e-17 92.0 99 58.6
Eucgr.B03464 Eucalyptus grandis HOM05D005632 ORTHO05D006870 8.0e-17 90.5 99 54.5
MD13G1113300 Malus domestica HOM05D005632 ORTHO05D006870 1.0e-16 90.1 84 63.1
Peaxi162Scf00128g00929 Petunia axillaris HOM05D005632 ORTHO05D006870 1.4e-16 89.7 80 58.8
Sc11g0000640 Simmondsia chinensis HOM05D005632 ORTHO05D006870 1.8e-16 89.4 77 68.8
arahy.Tifrunner.gnm1.ann1.9W4XT6 Arachis hypogaea HOM05D005632 ORTHO05D006870 4.0e-16 88.2 107 49.5
arahy.Tifrunner.gnm1.ann1.A0WBES Arachis hypogaea HOM05D005632 ORTHO05D006870 4.0e-16 88.2 107 49.5
Glyma.08G102500 Glycine max HOM05D005632 ORTHO05D006870 5.2e-16 87.8 74 66.2
MD16G1112600 Malus domestica HOM05D005632 ORTHO05D006870 5.2e-16 87.8 84 65.5
Prupe.1G232800 Prunus persica HOM05D005632 ORTHO05D006870 6.8e-16 87.4 99 52.5
PGR102G1157 Punica granatum HOM05D005632 ORTHO05D006870 8.9e-16 87.0 99 53.5
TWI36G0420 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 8.9e-16 87.0 107 48.6
TWI36G0711 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 8.9e-16 87.0 107 48.6
Cfa009317 Carpinus fangiana HOM05D005632 ORTHO05D006870 1.2e-15 86.7 99 51.5
Haze_12372 Corylus avellana HOM05D005632 ORTHO05D006870 1.2e-15 86.7 99 51.5
ECA234G0324 Erigeron canadensis HOM05D005632 ORTHO05D006870 2.6e-15 85.5 96 53.1
Manes.13G016200 Manihot esculenta HOM05D005632 ORTHO05D006870 2.6e-15 85.5 84 63.1
QL03p054693 Quercus lobata HOM05D005632 ORTHO05D006870 2.6e-15 85.5 96 53.1
Glyma.05G145700 Glycine max HOM05D005632 ORTHO05D006870 3.4e-15 85.1 74 64.9
Hma1.2p1_1340F.1_g276780 Hydrangea macrophylla HOM05D005632 ORTHO05D006870 3.4e-15 85.1 99 51.5
Phvul.002G175800 Phaseolus vulgaris HOM05D005632 ORTHO05D006870 3.4e-15 85.1 97 52.6
Sabra10G0048400 Salix brachista HOM05D005632 ORTHO05D006870 3.4e-15 85.1 98 53.1
VMungo0251G3265 Vigna mungo HOM05D005632 ORTHO05D006870 4.4e-15 84.7 74 66.2
GSVIVG01010339001 Vitis vinifera HOM05D005632 ORTHO05D006870 5.8e-15 84.3 76 65.8
Actinidia30669 Actinidia chinensis HOM05D005632 ORTHO05D006870 7.5e-15 84.0 94 52.1
Nitab4.5_0007557g0010 Nicotiana tabacum HOM05D005632 ORTHO05D006870 1.3e-14 83.2 85 56.5
Potri.010G056800 Populus trichocarpa HOM05D005632 ORTHO05D006870 1.7e-14 82.8 72 61.1
Dinv14805 Davidia involucrata HOM05D005632 ORTHO05D006870 3.7e-14 81.6 90 56.7
TAR622G0018 Trochodendron aralioides HOM05D005632 ORTHO05D006870 6.4e-14 80.9 94 50.0
CiPaw.05G114600 Carya illinoinensis HOM05D005632 ORTHO05D006870 8.3e-14 80.5 72 63.9
TPR.G17101 Trifolium pratense HOM05D005632 ORTHO05D006870 8.3e-14 80.5 113 46.9
Duzib248G1043 Durio zibethinus HOM05D005632 ORTHO05D006870 1.1e-13 80.1 100 49.0
Lj6C822T14 Lonicera japonica HOM05D005632 ORTHO05D006870 1.1e-13 80.1 97 52.6
PSO063G5034 Papaver somniferum HOM05D005632 ORTHO05D006870 1.1e-13 80.1 105 51.4
MSTRG.522 Avicennia marina HOM05D005632 ORTHO05D006870 1.4e-13 79.7 86 58.1
COL.COLO4_12811 Corchorus olitorius HOM05D005632 ORTHO05D006870 1.4e-13 79.7 84 53.6
TWI18G1462 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 1.4e-13 79.7 100 49.0
EL10Ac6g13443 Beta vulgaris HOM05D005632 ORTHO05D006870 1.8e-13 79.3 83 56.6
Aqoxy5G03509 Aquilegia oxysepala HOM05D005632 ORTHO05D006870 2.4e-13 79.0 98 49.0
AUR62005576 Chenopodium quinoa HOM05D005632 ORTHO05D006870 2.4e-13 79.0 79 59.5
AUR62024154 Chenopodium quinoa HOM05D005632 ORTHO05D006870 2.4e-13 79.0 79 59.5
CiPaw.06G099900 Carya illinoinensis HOM05D005632 ORTHO05D006870 3.2e-13 78.6 97 51.5
Medtr8g080180 Medicago truncatula HOM05D005632 ORTHO05D006870 3.2e-13 78.6 64 67.2
PSO782G1057 Papaver somniferum HOM05D005632 ORTHO05D006870 4.1e-13 78.2 105 50.5
Thecc.02G274700 Theobroma cacao HOM05D005632 ORTHO05D006870 4.1e-13 78.2 99 49.5
Ca_18063_v3 Cicer arietinum L. HOM05D005632 ORTHO05D006870 5.4e-13 77.8 114 46.5
Migut.E00242 Erythranthe guttata HOM05D005632 ORTHO05D006870 5.4e-13 77.8 70 60.0
Psat7g079520 Pisum sativum HOM05D005632 ORTHO05D006870 5.4e-13 77.8 95 50.5
Dinv10990 Davidia involucrata HOM05D005632 ORTHO05D006870 9.2e-13 77.0 78 61.5
Duzib251G0024 Durio zibethinus HOM05D005632 ORTHO05D006870 9.2e-13 77.0 101 48.5
TAR374G0791 Trochodendron aralioides HOM05D005632 ORTHO05D006870 9.2e-13 77.0 95 49.5
Nitab4.5_0000240g0120 Nicotiana tabacum HOM05D005632 ORTHO05D006870 1.6e-12 76.3 84 52.4
Hund06068 Selenicereus undatus HOM05D005632 ORTHO05D006870 2.0e-12 75.9 83 56.6
CSS0014265 Camellia sinensis var. sinensis HOM05D005632 ORTHO05D006870 3.5e-12 75.1 82 53.7
PGSC0003DMG400017445 Solanum tuberosum HOM05D005632 ORTHO05D006870 3.5e-12 75.1 79 54.4
MSTRG.13321 Avicennia marina HOM05D005632 ORTHO05D006870 4.6e-12 74.7 72 59.7
Gohir.A01G155800 Gossypium hirsutum HOM05D005632 ORTHO05D006870 4.6e-12 74.7 101 49.5
Gohir.D05G312000 Gossypium hirsutum HOM05D005632 ORTHO05D006870 4.6e-12 74.7 88 53.4
Sopen05g009890 Solanum pennellii HOM05D005632 ORTHO05D006870 4.6e-12 74.7 79 54.4
Gohir.A05G311200 Gossypium hirsutum HOM05D005632 ORTHO05D006870 6.0e-12 74.3 88 53.4
Gorai.002G191000 Gossypium raimondii HOM05D005632 ORTHO05D006870 6.0e-12 74.3 101 49.5
Gorai.009G333200 Gossypium raimondii HOM05D005632 ORTHO05D006870 6.0e-12 74.3 88 53.4
Lj4g0009016 Lotus japonicus HOM05D005632 ORTHO05D006870 6.0e-12 74.3 74 59.5
CANSAT01G1284 Cannabis sativa HOM05D005632 ORTHO05D006870 7.8e-12 73.9 61 65.6
Cpa.g.sc43.34 Carica papaya HOM05D005632 ORTHO05D006870 7.8e-12 73.9 74 60.8
DCAR_031183 Daucus carota HOM05D005632 ORTHO05D006870 7.8e-12 73.9 84 54.8
Nn3g16536 Nelumbo nucifera HOM05D005632 ORTHO05D006870 7.8e-12 73.9 88 54.5
Sc14g0008990 Simmondsia chinensis HOM05D005632 ORTHO05D006870 7.8e-12 73.9 76 57.9
FvH4_4g24210 Fragaria vesca HOM05D005632 ORTHO05D006870 1.3e-11 73.2 93 54.8
Oeu020312.1 Olea europaea HOM05D005632 ORTHO05D006870 1.7e-11 72.8 95 46.3
HPP92_001245 Vanilla planifolia HOM05D005632 ORTHO05D006870 1.7e-11 72.8 81 55.6
CANSAT01G1127 Cannabis sativa HOM05D005632 ORTHO05D006870 2.3e-11 72.4 90 51.1
Peaxi162Scf00797g00115 Petunia axillaris HOM05D005632 ORTHO05D006870 3.0e-11 72.0 88 52.3
Lalb_Chr07g0187331 Lupinus albus HOM05D005632 ORTHO05D006870 3.9e-11 71.6 61 63.9
FAN07G2757 Fragaria x ananassa HOM05D005632 ORTHO05D006870 5.0e-11 71.2 93 52.7
FAN12G4104 Fragaria x ananassa HOM05D005632 ORTHO05D006870 5.0e-11 71.2 93 52.7
FAN17G2842 Fragaria x ananassa HOM05D005632 ORTHO05D006870 5.0e-11 71.2 93 52.7
FAN22G2239 Fragaria x ananassa HOM05D005632 ORTHO05D006870 6.6e-11 70.9 93 52.7
CAN.G947.28 Capsicum annuum HOM05D005632 ORTHO05D006870 8.6e-11 70.5 83 50.6
Gohir.D01G154266 Gossypium hirsutum HOM05D005632 ORTHO05D006870 1.1e-10 70.1 101 47.5
HanXRQChr12g0385931 Helianthus annuus HOM05D005632 ORTHO05D006870 1.1e-10 70.1 66 59.1
Lsat_1_v5_gn_4_2920 Lactuca sativa HOM05D005632 ORTHO05D006870 1.1e-10 70.1 73 53.4
Migut.K00701 Erythranthe guttata HOM05D005632 ORTHO05D006870 2.5e-10 68.9 75 58.7
Oeu042062.1 Olea europaea HOM05D005632 ORTHO05D006870 7.3e-10 67.4 102 47.1
HanXRQChr08g0207501 Helianthus annuus HOM05D005632 ORTHO05D006870 9.5e-10 67.0 57 64.9
Lsat_1_v5_gn_8_149761 Lactuca sativa HOM05D005632 ORTHO05D006870 1.6e-09 66.2 61 57.4
SGA_v2.0_scaffold87G27129 Striga asiatica HOM05D005632 ORTHO05D006870 2.1e-09 65.9 59 62.7
ECA233G1608 Erigeron canadensis HOM05D000084 ORTHO05D002602 3.6e-09 65.1 81 48.1
vmacro01082 Vaccinium macrocarpon HOM05D005632 ORTHO05D006870 6.2e-09 64.3 78 56.4
Lalb_Chr13g0294161 Lupinus albus HOM05D005632 ORTHO05D006870 8.0e-09 63.9 61 60.7
Sed0026720 Sechium edule HOM05D005632 ORTHO05D006870 1.1e-08 63.5 67 50.7
ClCG08G017290 Citrullus lanatus HOM05D005632 ORTHO05D006870 1.4e-08 63.2 75 52.0
Rhsim12G0029700 Rhododendron simsii HOM05D005632 ORTHO05D006870 1.4e-08 63.2 67 58.2
MELO3C010730.2 Cucumis melo HOM05D005632 ORTHO05D006870 1.8e-08 62.8 75 52.0
CsaV3_2G025340 Cucumis sativus L. HOM05D005632 ORTHO05D006870 4.0e-08 61.6 75 50.7
RcHm_v2.0_Chr4g0431051 Rosa chinensis HOM05D005632 ORTHO05D006870 6.8e-08 60.8 94 46.8
SalBow2G0748 Salvia bowleyana HOM05D005632 ORTHO05D006870 1.2e-07 60.1 78 44.9
Zm00001eb182310 Zea mays HOM05D005632 ORTHO05D006870 1.2e-07 60.1 77 48.1
Sed0020525 Sechium edule HOM05D005632 ORTHO05D006870 3.4e-07 58.5 76 44.7
Lalb_Chr03g0039231 Lupinus albus HOM05D005632 ORTHO05D006870 7.5e-07 57.4 64 50.0
MBI08_g36441_MAGBIO Magnolia biondii HOM05D005632 ORTHO05D006870 1.3e-06 56.6 71 49.3


User provided reference genes

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