Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 0.0e+00 1101.3 570 100.0
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 2.8e-143 513.1 486 62.1
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 2.9e-116 423.3 532 53.4
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 3.6e-106 389.8 432 57.6
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 2.3e-89 334.0 499 45.3
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 5.7e-88 329.3 528 43.9
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 3.1e-86 323.6 499 44.5
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 4.1e-86 323.2 835 34.6
BcaB01g02584 Brassica carinata HOM05D001224 ORTHO05D019989 9.2e-86 322.0 220 79.1
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 2.3e-84 317.4 372 54.0
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 5.6e-83 312.8 848 33.8
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 3.4e-80 303.5 538 40.1
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 4.4e-80 303.1 556 41.5
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-79 301.6 622 38.4
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.7e-79 301.2 776 35.3
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 3.2e-78 297.0 361 50.7
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 1.7e-76 291.2 345 53.0
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 2.3e-76 290.8 567 38.6
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 5.0e-76 289.7 527 42.9
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 5.6e-75 286.2 594 38.4
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 3.6e-74 283.5 334 51.8
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.5e-72 278.1 768 34.0
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 9.8e-72 275.4 473 42.3
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 1.3e-71 275.0 358 50.0
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 3.7e-71 273.5 334 51.2
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 1.6e-69 268.1 472 41.9
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.7e-68 264.6 334 49.7
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 2.3e-68 264.2 324 51.2
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.1e-67 261.9 626 35.9
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 1.9e-67 261.2 487 40.9
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 4.3e-67 260.0 472 41.1
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-65 255.0 350 46.9
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 2.6e-64 250.8 462 41.6
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-61 241.1 689 34.3
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 1.0e-60 238.8 602 36.0
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 3.9e-60 236.9 408 43.6
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 1.9e-59 234.6 402 43.8
BcaB07g33938 Brassica carinata HOM05D001224 ORTHO05D019989 4.3e-59 233.4 171 76.0
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 9.5e-59 232.3 614 35.5
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 2.1e-58 231.1 479 37.6
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 1.8e-57 228.0 449 40.3
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 4.0e-57 226.9 541 36.6
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 7.6e-56 222.6 685 32.6
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 2.1e-53 214.5 397 41.6
BcaB04g17609 Brassica carinata HOM05D001224 ORTHO05D019989 1.3e-52 211.8 193 63.7
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 5.6e-51 206.5 485 35.9
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 9.0e-49 199.1 373 39.4
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 3.8e-47 193.7 192 57.3
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 3.8e-47 193.7 192 57.3
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 4.9e-47 193.4 300 45.3
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 1.9e-46 191.4 476 36.3
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.9e-46 191.4 466 35.4
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 5.4e-46 189.9 525 32.4
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 4.6e-45 186.8 448 36.4
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 7.8e-45 186.0 183 55.2
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 1.9e-43 181.4 407 37.6
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 3.3e-43 180.6 176 56.8
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-41 175.3 448 37.7
C05p27310 Brassica napus HOM05D001224 ORTHO05D010571 5.4e-38 163.3 289 42.9
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 2.1e-37 161.4 293 39.6
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-36 159.1 461 33.4
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 5.1e-36 156.8 459 33.6
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 2.1e-34 151.4 330 34.2
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 6.2e-34 149.8 334 37.4
BolC8t49589H Brassica oleracea HOM05D001224 ORTHO05D010571 8.1e-34 149.4 214 47.7
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-33 147.9 123 62.6
BolC5t31444H Brassica oleracea HOM05D001224 ORTHO05D003044 4.5e-32 143.7 183 50.8
BolC5t33261H Brassica oleracea HOM05D001224 ORTHO05D014478 5.8e-32 143.3 362 34.3
BcaC05g25880 Brassica carinata HOM05D001224 ORTHO05D018692 4.9e-31 140.2 397 35.5
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 8.4e-31 139.4 482 29.5
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 6.0e-29 133.3 318 33.6
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 1.9e-27 128.3 256 40.6
BcaB04g16977 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-26 125.6 309 36.9
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 1.6e-26 125.2 318 37.1
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 2.8e-26 124.4 323 33.7
BcaB07g33214 Brassica carinata HOM05D001224 ORTHO05D018563 2.8e-26 124.4 241 41.1
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 1.8e-25 121.7 95 68.4
BolC4t25070H Brassica oleracea HOM05D001224 ORTHO05D014478 2.4e-25 121.3 228 41.7
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 9.0e-25 119.4 399 31.3
BolC4t25341H Brassica oleracea HOM05D001224 ORTHO05D010571 2.0e-24 118.2 175 47.4
BcaB01g01374 Brassica carinata HOM05D001224 ORTHO05D018563 1.3e-23 115.5 248 38.7
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 1.3e-23 115.5 186 40.9
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 1.3e-23 115.5 180 41.1
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 1.3e-23 115.5 404 29.5
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 4.9e-23 113.6 387 29.7
BcaB02g11186 Brassica carinata HOM05D001224 ORTHO05D092062 1.9e-22 111.7 231 39.0
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 1.9e-22 111.7 132 50.8
BolC1t04759H Brassica oleracea HOM05D001224 ORTHO05D010571 4.2e-22 110.5 91 64.8
BolC1t03176H Brassica oleracea HOM05D001224 ORTHO05D010571 7.1e-22 109.8 171 43.9
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 2.1e-21 108.2 432 27.3
BolC6t36715H Brassica oleracea HOM05D001224 ORTHO05D024547 1.3e-20 105.5 88 64.8
BcaB07g33904 Brassica carinata HOM05D001224 ORTHO05D003044 8.7e-20 102.8 153 43.1
BcaC09g48835 Brassica carinata HOM05D001224 ORTHO05D010571 8.7e-20 102.8 424 29.0
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 7.4e-19 99.8 413 28.6
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 1.3e-18 99.0 310 29.0
C07p06970 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-18 99.0 215 37.2
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 1.3e-18 99.0 78 66.7
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 1.6e-18 98.6 421 26.4
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 2.2e-18 98.2 433 26.1
C07p01180 Brassica napus HOM05D001224 ORTHO05D010571 2.8e-18 97.8 207 38.2
BraA01t02478Z Brassica rapa HOM05D001224 ORTHO05D010571 6.3e-18 96.7 73 71.2
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 1.4e-17 95.5 429 26.6
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-17 94.7 443 28.4
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 2.4e-17 94.7 371 27.8
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 3.1e-17 94.4 137 40.9
C04p35170 Brassica napus HOM05D001224 ORTHO05D010571 4.1e-17 94.0 88 59.1
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 6.9e-17 93.2 177 35.0
BcaB04g17593 Brassica carinata HOM05D001224 ORTHO05D091055 9.0e-17 92.8 234 36.8
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 2.6e-16 91.3 198 34.3
C07p06960 Brassica napus HOM05D001224 ORTHO05D024547 5.9e-16 90.1 131 45.0
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 5.9e-16 90.1 123 49.6
BcaB04g17592 Brassica carinata HOM05D001224 ORTHO05D016074 2.2e-15 88.2 62 67.7
C04p55410 Brassica napus HOM05D001224 ORTHO05D010571 5.0e-15 87.0 190 37.9
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 8.5e-15 86.3 153 41.8
BraA06t25343Z Brassica rapa HOM05D001224 ORTHO05D024547 8.5e-15 86.3 76 61.8
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-14 85.9 384 27.3
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 1.4e-14 85.5 151 35.8
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 1.4e-14 85.5 264 28.4
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 1.9e-14 85.1 170 34.7
BolC1t04760H Brassica oleracea HOM05D001224 ORTHO05D024547 1.9e-14 85.1 161 43.5
BcaB04g16976 Brassica carinata HOM05D001224 ORTHO05D016074 5.5e-14 83.6 56 69.6
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 5.5e-14 83.6 166 39.8
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 7.2e-14 83.2 285 27.4
BcaB04g17705 Brassica carinata HOM05D001224 ORTHO05D016074 9.3e-14 82.8 71 54.9
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 9.3e-14 82.8 166 34.9
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 1.2e-13 82.4 393 26.5
BcaC05g28166 Brassica carinata HOM05D001224 ORTHO05D021713 4.6e-13 80.5 304 31.2
BraSC37t46115Z Brassica rapa HOM05D001224 ORTHO05D018692 7.9e-13 79.7 91 53.8
C07p01210 Brassica napus HOM05D001224 ORTHO05D003044 2.3e-12 78.2 173 37.6
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 5.1e-12 77.0 154 39.6
BcaB06g27208 Brassica carinata HOM05D001224 ORTHO05D093588 1.1e-11 75.9 57 75.4
BraA09t37754Z Brassica rapa HOM05D001224 ORTHO05D012331 1.5e-11 75.5 210 28.6
A09p21550 Brassica napus HOM05D023185 ORTHO05D012331 2.5e-11 74.7 190 29.5
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-11 74.3 94 50.0
C01p45390 Brassica napus HOM05D001224 ORTHO05D003044 9.7e-11 72.8 94 48.9
C07p01170 Brassica napus HOM05D001224 ORTHO05D003044 3.7e-10 70.9 185 35.1
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 6.3e-10 70.1 285 27.4
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 1.1e-09 69.3 394 25.6
A07p05880 Brassica napus HOM05D001224 ORTHO05D003044 1.1e-09 69.3 55 65.5
BraA03t15286Z Brassica rapa HOM05D001224 ORTHO05D018692 1.1e-09 69.3 55 67.3
BcaB04g18021 Brassica carinata HOM05D001224 ORTHO05D092713 1.4e-09 68.9 228 29.8
C01p48030 Brassica napus HOM05D001224 ORTHO05D018692 1.8e-09 68.6 96 49.0
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-09 68.2 270 29.3
BcaB06g26507 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-09 68.2 150 34.0
A08p08820 Brassica napus HOM05D001224 ORTHO05D003044 3.1e-09 67.8 52 69.2
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-09 67.8 55 65.5
C05p27320 Brassica napus HOM05D001224 ORTHO05D003044 3.1e-09 67.8 55 65.5
C05p45380 Brassica napus HOM05D001224 ORTHO05D003044 3.1e-09 67.8 55 65.5
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 3.1e-09 67.8 55 65.5
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 3.1e-09 67.8 384 24.7
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 5.3e-09 67.0 256 30.1
BolC6t36797H Brassica oleracea HOM05D001224 ORTHO05D003044 5.3e-09 67.0 94 45.7
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 6.9e-09 66.6 369 26.3
BcaC07g37923 Brassica carinata HOM05D001224 ORTHO05D016739 1.5e-08 65.5 247 29.6
BcaB06g27849 Brassica carinata HOM05D001224 ORTHO05D091028 2.0e-08 65.1 191 32.5
BcaC01g02361 Brassica carinata HOM05D001224 ORTHO05D016739 4.5e-08 63.9 191 28.3
C06p04820 Brassica napus HOM05D001224 ORTHO05D003044 4.5e-08 63.9 55 61.8
BcaC02g11933 Brassica carinata HOM05D001224 ORTHO05D016111 5.9e-08 63.5 420 24.0
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 5.9e-08 63.5 60 60.0
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 7.7e-08 63.2 288 28.1
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.0e-07 62.8 50 58.0
BcaC08g45028 Brassica carinata HOM05D000086 ORTHO05D004422 1.3e-07 62.4 99 46.5
BcaB03g16071 Brassica carinata HOM05D001224 ORTHO05D095856 1.7e-07 62.0 152 33.6
A10p08860 Brassica napus HOM05D001224 ORTHO05D003044 2.2e-07 61.6 43 74.4
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 2.9e-07 61.2 93 45.2
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 3.8e-07 60.8 322 26.1
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 5.0e-07 60.5 182 33.5
C07p08950 Brassica napus HOM05D001224 ORTHO05D042023 8.5e-07 59.7 44 61.4
BraA03t15284Z Brassica rapa HOM05D001224 ORTHO05D042023 2.5e-06 58.2 44 61.4
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 4.2e-06 57.4 90 33.3
BraA01t01573Z Brassica rapa HOM05D001224 ORTHO05D018692 4.2e-06 57.4 96 44.8
C03p69230 Brassica napus HOM05D001224 ORTHO05D042758 7.2e-06 56.6 158 29.7
BolC3t19180H Brassica oleracea HOM05D001224 ORTHO05D042758 7.2e-06 56.6 158 29.7


User provided reference genes

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