Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24182 Brassica carinata HOM05D000034 ORTHO05D016699 8.4e-47 189.9 88 100.0
BcaB05g22061 Brassica carinata HOM05D000034 ORTHO05D016699 7.1e-46 186.8 88 97.7
BcaB05g23950 Brassica carinata HOM05D000034 ORTHO05D000037 7.8e-45 183.3 88 95.5
BcaC01g06241 Brassica carinata HOM05D000034 ORTHO05D000037 7.1e-38 160.2 88 85.2
BcaC05g27115 Brassica carinata HOM05D000034 ORTHO05D016699 9.3e-38 159.8 88 85.2
BcaC08g43145 Brassica carinata HOM05D000034 ORTHO05D000037 1.2e-37 159.5 88 85.2
BcaC04g23169 Brassica carinata HOM05D000034 ORTHO05D016699 2.3e-36 155.2 88 83.0
BcaC02g11757 Brassica carinata HOM05D000034 ORTHO05D016699 1.1e-33 146.4 87 79.3
C04p69020 Brassica napus HOM05D000034 ORTHO05D000037 2.0e-32 142.1 88 75.0
BcaC05g25828 Brassica carinata HOM05D000034 ORTHO05D000037 3.9e-28 127.9 90 65.6
C06p06110 Brassica napus HOM05D001371 ORTHO05D001319 8.2e-26 120.2 70 81.4
BcaB04g16972 Brassica carinata HOM05D000034 ORTHO05D000037 1.2e-21 106.3 109 50.5
BcaC03g15863 Brassica carinata HOM05D000034 ORTHO05D016699 3.5e-21 104.8 68 73.5
BcaC04g20692 Brassica carinata HOM05D000034 ORTHO05D016699 7.9e-21 103.6 68 72.1
BcaC09g51946 Brassica carinata HOM05D000034 ORTHO05D016699 3.0e-20 101.7 68 72.1
C06p13580 Brassica napus HOM05D000034 ORTHO05D000037 3.0e-20 101.7 104 49.0
BcaC01g02745 Brassica carinata HOM05D006735 ORTHO05D009558 1.4e-17 92.8 78 60.3
BcaC01g01276 Brassica carinata HOM05D000034 ORTHO05D000037 2.2e-15 85.5 121 43.8
BolC3t21439H Brassica oleracea HOM05D000034 ORTHO05D016699 6.5e-07 57.4 83 44.6
BolC3t17756H Brassica oleracea HOM05D000034 ORTHO05D016699 5.5e-06 54.3 89 41.6


User provided reference genes

Program Settings