Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 1.6e-36 155.6 81 100.0
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 1.1e-32 142.9 81 90.1
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 1.4e-32 142.5 81 90.1
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 2.0e-23 112.1 82 74.4
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 5.9e-23 110.5 82 73.2
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 1.7e-22 109.0 82 69.5
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 5.2e-19 97.4 75 72.0
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 4.4e-18 94.4 82 67.1
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 9.8e-18 93.2 82 64.6
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 8.3e-17 90.1 82 59.8
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 3.0e-14 81.6 88 54.5
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 1.9e-13 79.0 83 60.2
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.6e-12 75.9 87 55.2
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 6.2e-12 73.9 87 54.0
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.1e-11 73.2 87 54.0
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 1.8e-11 72.4 87 54.0
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 1.2e-10 69.7 88 50.0
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 1.2e-10 69.7 87 50.6
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 2.6e-10 68.6 88 50.0
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 4.4e-10 67.8 87 49.4
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 4.4e-10 67.8 88 48.9
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 5.8e-10 67.4 51 74.5
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 2.2e-09 65.5 78 55.1
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 6.4e-09 63.9 73 50.7
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 8.3e-09 63.5 89 52.8
Carub.0002s1131 Capsella rubella HOM05D009162 ORTHO05D012456 1.6e-07 59.3 74 48.6
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 4.6e-07 57.8 91 46.2
AL2G22380 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 7.8e-07 57.0 81 53.1
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 1.0e-06 56.6 90 47.8
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 2.3e-06 55.5 87 48.3
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 3.0e-06 55.1 89 44.9


User provided reference genes

Program Settings