Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24109 Brassica carinata HOM05D007057 ORTHO05D008878 1.8e-41 172.6 114 100.0
BcaC03g14701 Brassica carinata HOM05D007057 ORTHO05D008878 1.2e-34 149.8 114 82.5
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 9.9e-32 140.2 106 84.0
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 4.9e-31 137.9 106 92.5
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 1.1e-30 136.7 106 81.1
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 3.2e-30 135.2 106 91.5
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 3.2e-30 135.2 106 91.5
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 5.4e-30 134.4 106 77.4
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 1.6e-29 132.9 106 90.6
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 1.6e-29 132.9 106 90.6
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.1e-29 132.5 106 79.2
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 2.1e-29 132.5 106 79.2
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 4.6e-29 131.3 106 87.7
BcaC03g14699 Brassica carinata HOM05D007057 ORTHO05D008878 2.3e-28 129.0 104 77.9
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 8.6e-28 127.1 106 71.7
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 4.3e-27 124.8 106 73.6
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 6.6e-20 100.9 51 96.1
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 3.8e-15 85.1 104 68.3
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 4.9e-15 84.7 105 66.7
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 5.4e-14 81.3 105 66.7
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 7.1e-14 80.9 105 63.8
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 2.1e-13 79.3 105 65.7
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 2.7e-13 79.0 105 63.8
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 2.7e-13 79.0 106 64.2
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 3.5e-13 78.6 105 60.0
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 4.6e-13 78.2 106 64.2
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 4.6e-13 78.2 106 64.2
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 7.9e-13 77.4 105 61.9
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 1.0e-12 77.0 106 63.2
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 1.3e-12 76.6 105 59.0
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 1.8e-12 76.3 105 59.0
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 2.3e-12 75.9 51 70.6
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 3.0e-12 75.5 105 62.9
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 5.1e-12 74.7 105 59.0
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 5.1e-12 74.7 50 70.0
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 5.1e-12 74.7 50 70.0
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 5.1e-12 74.7 106 63.2
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 6.7e-12 74.3 106 53.8
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 6.7e-12 74.3 50 70.0
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 1.1e-11 73.6 109 60.6
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 54.7
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 54.7
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 54.7
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 54.7
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 54.7
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 60.4
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 1.9e-11 72.8 105 59.0
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 1.9e-11 72.8 106 56.6
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 2.5e-11 72.4 105 58.1
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 3.3e-11 72.0 106 62.3
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 3.3e-11 72.0 106 61.3
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 4.3e-11 71.6 105 61.9
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 5.6e-11 71.2 105 61.0
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 7.4e-11 70.9 106 52.8
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 2.8e-10 68.9 44 70.5
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 8.1e-10 67.4 45 68.9
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 8.1e-10 67.4 49 67.3
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 2.4e-09 65.9 49 59.2
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 4.0e-09 65.1 51 58.8
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 2.6e-08 62.4 106 52.8
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.2e-07 59.3 45 66.7


User provided reference genes

Program Settings