Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 2.6e-49 198.4 98 100.0
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 1.0e-29 133.3 117 63.2
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 2.8e-19 98.6 117 45.3
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 2.8e-19 98.6 110 49.1
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 1.8e-18 95.9 98 56.1
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 1.8e-18 95.9 107 47.7
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 3.1e-18 95.1 117 43.6
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 9.1e-18 93.6 110 48.2
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 5.9e-17 90.9 117 42.7
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 5.9e-17 90.9 117 41.9
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 7.7e-17 90.5 117 42.7
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 1.3e-16 89.7 117 41.9
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 1.3e-16 89.7 117 41.0
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-16 89.4 117 41.9
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.7e-16 89.4 117 41.0
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 1.7e-16 89.4 117 43.6
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 1.7e-16 89.4 117 43.6
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.7e-16 89.4 117 43.6
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 1.7e-16 89.4 116 42.2
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.7e-16 89.4 116 42.2
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.7e-16 89.4 117 41.0
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 3.8e-16 88.2 119 44.5
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 3.8e-16 88.2 117 43.6
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 3.8e-16 88.2 117 43.6
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 3.8e-16 88.2 117 43.6
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 3.8e-16 88.2 116 41.4
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 3.8e-16 88.2 117 43.6
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 5.0e-16 87.8 117 41.9
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 5.0e-16 87.8 117 43.6
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 6.5e-16 87.4 116 41.4
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 8.5e-16 87.0 79 59.5
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 8.5e-16 87.0 117 39.3
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 8.5e-16 87.0 116 41.4
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 8.5e-16 87.0 117 39.3
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-15 86.7 117 41.9
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 1.1e-15 86.7 117 41.9
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.1e-15 86.7 116 41.4
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 1.5e-15 86.3 116 40.5
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-15 86.3 117 42.7
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-15 86.3 113 43.4
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 1.9e-15 85.9 116 40.5
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-15 85.5 117 41.0
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-15 85.5 115 41.7
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 2.5e-15 85.5 117 42.7
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 2.5e-15 85.5 117 41.0
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 3.2e-15 85.1 117 43.6
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 4.2e-15 84.7 115 40.9
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 9.4e-15 83.6 117 41.9
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 2.1e-14 82.4 111 42.3
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 4.7e-14 81.3 113 41.6
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 4.7e-14 81.3 113 41.6
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 1.8e-13 79.3 111 37.8
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 2.3e-13 79.0 118 39.8
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-12 76.6 117 39.3
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 2.0e-12 75.9 108 40.7
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 2.0e-12 75.9 108 40.7
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.4e-12 74.7 117 35.9
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 5.7e-12 74.3 116 38.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 1.3e-11 73.2 117 35.9
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-11 72.8 108 44.4
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-11 72.8 117 35.0
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 2.2e-11 72.4 108 38.0
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-11 72.4 107 42.1
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 2.2e-11 72.4 116 37.9
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 6.3e-11 70.9 36 88.9
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 6.3e-11 70.9 36 88.9
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-10 68.9 117 33.3
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-10 68.9 117 33.3
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 3.1e-10 68.6 95 42.1
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 4.1e-10 68.2 106 39.6
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 5.4e-10 67.8 117 35.9
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 2.0e-09 65.9 117 35.9
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 2.0e-09 65.9 117 35.9
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 3.5e-09 65.1 117 32.5
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 4.5e-09 64.7 114 39.5
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 5.9e-09 64.3 115 32.2
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 7.7e-09 63.9 117 35.0
C06p00350 Brassica napus HOM05D000353 ORTHO05D097831 7.7e-09 63.9 47 72.3
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-08 63.5 122 36.9
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 1.3e-08 63.2 78 47.4
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.7e-08 62.8 50 64.0
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-08 62.4 114 36.8
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 2.9e-08 62.0 92 40.2
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 5.0e-08 61.2 97 40.2
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 6.5e-08 60.8 36 72.2
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 8.5e-08 60.5 122 35.2
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 8.5e-08 60.5 73 43.8
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.1e-07 60.1 97 35.1
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-07 60.1 88 34.1
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 3.2e-07 58.5 96 40.6
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 4.2e-07 58.2 93 36.6
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 5.5e-07 57.8 77 39.0
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 9.4e-07 57.0 122 32.8
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 9.4e-07 57.0 114 32.5
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 9.4e-07 57.0 69 44.9
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-06 56.6 114 35.1
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-06 56.6 122 33.6
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-06 56.2 114 35.1
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-06 55.8 82 42.7
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-06 55.8 122 33.6
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-06 55.5 99 39.4
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 2.7e-06 55.5 114 34.2
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 2.7e-06 55.5 69 43.5
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.7e-06 55.5 49 49.0
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-06 54.7 114 35.1
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-06 54.7 122 34.4
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 4.7e-06 54.7 114 34.2
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 4.7e-06 54.7 36 66.7
BcaB04g18446 Brassica carinata HOM05D000471 ORTHO05D013512 8.0e-06 53.9 91 35.2
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-06 53.9 115 33.9
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-06 53.9 115 33.9
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 8.0e-06 53.9 115 33.9


User provided reference genes

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