Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24091 Brassica carinata HOM05D003941 ORTHO05D020023 1.6e-112 409.5 206 100.0
BcaC03g14680 Brassica carinata HOM05D003941 ORTHO05D020023 3.4e-67 258.8 204 70.1
BolC2t08259H Brassica oleracea HOM05D003941 ORTHO05D020023 3.4e-67 258.8 204 70.1
C02p21200 Brassica napus HOM05D003941 ORTHO05D020023 5.0e-66 255.0 204 69.1
A02p13060 Brassica napus HOM05D003941 ORTHO05D020023 8.5e-66 254.2 204 68.6
BraA02t06362Z Brassica rapa HOM05D003941 ORTHO05D020023 9.4e-65 250.8 204 67.6
Sp5g19840 Schrenkiella parvula HOM05D003941 ORTHO05D020023 1.8e-28 130.2 180 44.4
AL2G20000 Arabidopsis lyrata HOM05D003941 ORTHO05D011535 1.1e-25 120.9 212 42.0
CARHR056660 Cardamine hirsuta HOM05D003941 ORTHO05D011535 2.1e-24 116.7 212 36.3
Thhalv10003075m.g Eutrema salsugineum HOM05D003941 ORTHO05D011535 6.1e-24 115.2 227 40.1
BraA03t13694Z Brassica rapa HOM05D003941 ORTHO05D011535 4.0e-23 112.5 233 35.6
A02p13080 Brassica napus HOM05D003941 ORTHO05D011535 6.8e-23 111.7 229 37.6
BraA02t06364Z Brassica rapa HOM05D003941 ORTHO05D011535 8.9e-23 111.3 229 37.6
AT1G65140 Arabidopsis thaliana HOM05D003941 ORTHO05D011535 1.2e-22 110.9 210 37.6
C02p21220 Brassica napus HOM05D003941 ORTHO05D011535 2.6e-22 109.8 180 40.6
BcaC03g14682 Brassica carinata HOM05D003941 ORTHO05D011535 6.4e-21 105.1 180 40.0
BolC2t08262H Brassica oleracea HOM05D003941 ORTHO05D011535 6.4e-21 105.1 180 40.0
BcaB05g24094 Brassica carinata HOM05D003941 ORTHO05D011535 8.3e-21 104.8 166 41.0
BcaC01g03050 Brassica carinata HOM05D003941 ORTHO05D011535 8.3e-21 104.8 235 34.0
A03p45620 Brassica napus HOM05D003941 ORTHO05D011535 1.8e-20 103.6 220 36.4
SpUn0054_0040 Schrenkiella parvula HOM05D003941 ORTHO05D011535 2.4e-20 103.2 173 39.9
C03p56670 Brassica napus HOM05D003941 ORTHO05D011535 4.1e-20 102.4 221 35.3
BolC3t17951H Brassica oleracea HOM05D003941 ORTHO05D011535 4.1e-20 102.4 221 35.3
AL2G20110 Arabidopsis lyrata HOM05D003941 ORTHO05D011535 7.0e-20 101.7 208 37.0
AL2G20090 Arabidopsis lyrata HOM05D003941 ORTHO05D011535 7.8e-19 98.2 170 37.6
BcaB08g34614 Brassica carinata HOM05D003941 ORTHO05D011535 2.3e-18 96.7 214 35.5
CARHR056650 Cardamine hirsuta HOM05D003941 ORTHO05D011535 2.3e-18 96.7 216 37.0
Carub.0002s1062 Capsella rubella HOM05D003941 ORTHO05D011535 5.0e-18 95.5 214 34.1
AT1G65170 Arabidopsis thaliana HOM05D003941 ORTHO05D011535 5.6e-17 92.0 204 34.8
Carub.0002s1031 Capsella rubella HOM05D003941 ORTHO05D011535 4.7e-16 89.0 165 35.2
THA.LOC104821900 Tarenaya hassleriana HOM05D003941 ORTHO05D012174 5.2e-15 85.5 185 33.5
Carub.0002s1032 Capsella rubella HOM05D003941 ORTHO05D011535 6.8e-15 85.1 128 39.8
THA.LOC104805708 Tarenaya hassleriana HOM05D003941 ORTHO05D002286 1.2e-11 74.3 139 35.3
CARHR056750 Cardamine hirsuta HOM05D003941 ORTHO05D009447 3.5e-11 72.8 191 29.8
Sp3g03240 Schrenkiella parvula HOM05D003941 ORTHO05D009447 3.5e-11 72.8 182 32.4
Thhalv10019959m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 7.8e-11 71.6 174 29.9
AT1G65120 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.7e-10 70.5 193 31.1
Aa31LG2G2300 Aethionema arabicum HOM05D003941 ORTHO05D059105 2.3e-10 70.1 98 42.9
AL2G19970 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.3e-10 70.1 180 32.2
AL2G19870 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 3.9e-10 69.3 192 30.2
BcaC03g14683 Brassica carinata HOM05D003941 ORTHO05D009447 3.9e-10 69.3 160 33.1
C02p21230 Brassica napus HOM05D003941 ORTHO05D009447 3.9e-10 69.3 160 33.1
BolC2t08263H Brassica oleracea HOM05D003941 ORTHO05D009447 3.9e-10 69.3 160 33.1
Carub.0002s1060 Capsella rubella HOM05D003941 ORTHO05D009447 3.9e-10 69.3 183 31.1
Aa31LG2G2310 Aethionema arabicum HOM05D003941 ORTHO05D009447 5.0e-10 68.9 216 28.7
CARHR056610 Cardamine hirsuta HOM05D003941 ORTHO05D009447 8.6e-10 68.2 168 31.5
BcaB05g24095 Brassica carinata HOM05D003941 ORTHO05D009447 1.1e-09 67.8 160 33.1
THA.LOC104821865 Tarenaya hassleriana HOM05D003941 ORTHO05D009447 4.3e-09 65.9 172 32.6
BraA02t06365Z Brassica rapa HOM05D003941 ORTHO05D009447 7.3e-09 65.1 160 31.9
A02p13090 Brassica napus HOM05D003941 ORTHO05D009447 9.5e-09 64.7 160 31.9
C02p21210 Brassica napus HOM05D003941 ORTHO05D009447 1.2e-08 64.3 160 30.0
Carub.0002s1061 Capsella rubella HOM05D003941 ORTHO05D009447 1.2e-08 64.3 192 29.2
BcaB07g29809 Brassica carinata HOM05D003941 ORTHO05D021624 1.6e-08 63.9 173 30.6
BcaB05g24093 Brassica carinata HOM05D003941 ORTHO05D009447 2.1e-08 63.5 216 26.9
Aa31LG2G2330 Aethionema arabicum HOM05D003941 ORTHO05D009447 1.8e-07 60.5 190 26.8
CARHR275710 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.3e-07 60.1 145 31.0
AT2G27630 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.1e-07 59.7 131 32.8
AL2G20180 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 4.0e-07 59.3 127 32.3
Carub.0002s1065 Capsella rubella HOM05D003941 ORTHO05D009447 4.0e-07 59.3 142 28.9
CARHR038510 Cardamine hirsuta HOM05D003941 ORTHO05D009447 4.0e-07 59.3 131 30.5
CARHR056630 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.6e-06 56.6 132 33.3


User provided reference genes

Program Settings