Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 2.2e-108 395.6 192 100.0
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 3.0e-97 358.6 192 89.6
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 5.6e-96 354.4 271 69.7
BolC4t23809H Brassica oleracea HOM05D009982 ORTHO05D006374 9.0e-94 347.1 192 85.9
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 1.4e-91 339.7 214 79.4
C02p43110 Brassica napus HOM05D009982 ORTHO05D006374 2.4e-78 295.8 164 85.4
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 1.3e-65 253.4 336 45.5
C06p11100 Brassica napus HOM05D009982 ORTHO05D006374 6.9e-54 214.5 106 90.6
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 8.5e-44 181.0 96 87.5
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 7.7e-37 157.9 102 79.4
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 7.7e-37 157.9 102 79.4
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 7.7e-37 157.9 102 79.4
C03p69750 Brassica napus HOM05D009982 ORTHO05D006374 2.2e-36 156.4 86 91.9
A04p04510 Brassica napus HOM05D009982 ORTHO05D006374 9.4e-35 151.0 102 76.5
BraA04t16161Z Brassica rapa HOM05D009982 ORTHO05D006374 4.7e-34 148.7 86 87.2
C04p67390 Brassica napus HOM05D009982 ORTHO05D006374 2.6e-32 142.9 69 89.9
BcaC01g01994 Brassica carinata HOM05D009982 ORTHO05D006374 3.0e-25 119.4 102 63.7
C01p39030 Brassica napus HOM05D009982 ORTHO05D006374 8.3e-23 111.3 60 91.7
BcaB01g05857 Brassica carinata HOM05D015617 ORTHO05D027394 2.3e-20 103.2 147 40.1
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 1.0e-17 94.4 88 42.0
Sp4g09480 Schrenkiella parvula HOM05D009982 ORTHO05D006374 1.0e-17 94.4 84 59.5
BolC3t19237H Brassica oleracea HOM05D009982 ORTHO05D006374 2.6e-16 89.7 47 89.4
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 6.3e-15 85.1 116 40.5
BcaB03g13748 Brassica carinata HOM05D009982 ORTHO05D006374 8.3e-15 84.7 160 37.5
BcaC04g21756 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-14 83.6 79 46.8
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 7.0e-14 81.6 80 41.2
BcaC03g15866 Brassica carinata HOM05D007948 ORTHO05D006374 1.6e-13 80.5 88 44.3
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 2.7e-13 79.7 89 44.9
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 1.0e-12 77.8 72 40.3
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 1.0e-12 77.8 72 40.3
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 1.0e-12 77.8 72 40.3
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 2.3e-12 76.6 72 40.3
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 2.9e-12 76.3 72 40.3
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 3.8e-12 75.9 106 36.8
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 3.8e-12 75.9 72 38.9
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 1.1e-11 74.3 86 47.7
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.5e-11 73.9 65 43.1
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 1.9e-11 73.6 72 38.9
C06p32540 Brassica napus HOM05D023181 ORTHO05D024499 3.3e-11 72.8 60 68.3
BolC6t38376H Brassica oleracea HOM05D023181 ORTHO05D024499 3.3e-11 72.8 60 68.3
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 5.6e-11 72.0 90 35.6
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 7.3e-11 71.6 97 32.0
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 9.5e-11 71.2 70 42.9
Sp3g26770 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.2e-10 70.9 85 41.2
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 2.8e-10 69.7 74 39.2
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 2.8e-10 69.7 97 35.1
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 2.8e-10 69.7 64 37.5
Sp4g10030 Schrenkiella parvula HOM05D012607 ORTHO05D014259 4.7e-10 68.9 70 42.9
C02p57990 Brassica napus HOM05D023181 ORTHO05D024499 1.4e-09 67.4 60 63.3
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 1.4e-09 67.4 69 40.6
BraA07t28376Z Brassica rapa HOM05D014211 ORTHO05D016021 1.4e-09 67.4 88 46.6
BolC2t08062H Brassica oleracea HOM05D008134 ORTHO05D006374 2.3e-09 66.6 64 40.6
BraA02t08206Z Brassica rapa HOM05D007948 ORTHO05D006374 2.3e-09 66.6 69 42.0
A07p05790 Brassica napus HOM05D014211 ORTHO05D016021 3.1e-09 66.2 88 46.6
A07p05810 Brassica napus HOM05D014211 ORTHO05D016021 3.1e-09 66.2 88 46.6
BolC7t40924H Brassica oleracea HOM05D007948 ORTHO05D006374 3.1e-09 66.2 69 42.0
C05p28440 Brassica napus HOM05D008134 ORTHO05D012640 4.0e-09 65.9 65 36.9
BolC2t10321H Brassica oleracea HOM05D007948 ORTHO05D006374 5.2e-09 65.5 88 45.5
Sp5g20400 Schrenkiella parvula HOM05D008134 ORTHO05D006374 5.2e-09 65.5 155 31.0
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 6.8e-09 65.1 104 34.6
A07p05640 Brassica napus HOM05D014211 ORTHO05D016021 6.8e-09 65.1 88 46.6
A07p05660 Brassica napus HOM05D014211 ORTHO05D016021 6.8e-09 65.1 88 46.6
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 8.9e-09 64.7 91 38.5
SpUn0001_0460 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.5e-08 63.9 128 32.0
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 2.6e-08 63.2 154 29.9
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.6e-08 63.2 109 34.9
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 3.4e-08 62.8 191 27.7
BolC2t08332H Brassica oleracea HOM05D007948 ORTHO05D006374 5.8e-08 62.0 98 31.6
BcaC04g20586 Brassica carinata HOM05D007948 ORTHO05D006374 7.5e-08 61.6 61 45.9
A07p05680 Brassica napus HOM05D014211 ORTHO05D016021 7.5e-08 61.6 88 44.3
BolC3t17984H Brassica oleracea HOM05D008134 ORTHO05D006374 1.3e-07 60.8 55 36.4
THA.LOC104813232 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 2.2e-07 60.1 69 37.7
Aa31LG8G12090 Aethionema arabicum HOM05D001220 ORTHO05D000110 8.3e-07 58.2 69 39.1
A07p15050 Brassica napus HOM05D015617 ORTHO05D027394 1.1e-06 57.8 83 34.9
BcaB07g32591 Brassica carinata HOM05D007948 ORTHO05D006374 1.4e-06 57.4 57 40.4
BcaC01g02007 Brassica carinata HOM05D007948 ORTHO05D006374 1.9e-06 57.0 70 50.0
BolC8t48430H Brassica oleracea HOM05D011111 ORTHO05D001112 1.9e-06 57.0 88 27.3
SpUn0011_0060 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.4e-06 56.6 53 41.5
SpUn0023_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.4e-06 56.6 53 41.5
SpUn0001_0790 Schrenkiella parvula HOM05D007948 ORTHO05D006374 9.2e-06 54.7 70 37.1


User provided reference genes

Program Settings