Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 4.5e-141 504.6 256 100.0
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 9.7e-128 460.3 256 93.4
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.1e-126 456.8 256 92.6
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 3.1e-126 455.3 256 93.0
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 3.1e-126 455.3 256 93.0
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 3.4e-125 451.8 252 92.9
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 6.9e-118 427.6 256 87.5
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 6.9e-118 427.6 256 87.5
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 6.9e-118 427.6 256 87.5
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 3.2e-115 418.7 256 84.8
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 8.2e-111 404.1 256 81.2
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.3e-108 396.7 259 79.9
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.2e-106 390.2 255 80.4
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 8.0e-106 387.5 255 79.6
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.3e-87 327.0 263 68.8
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 4.1e-86 322.0 256 68.4
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 4.4e-72 275.4 250 58.4
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 3.2e-70 269.2 249 57.4
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 7.8e-69 264.6 254 56.3
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.6e-67 258.5 254 56.7
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.6e-67 258.5 254 56.7
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 4.7e-66 255.4 257 54.9
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 6.2e-66 255.0 251 56.6
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 8.9e-65 251.1 257 54.1
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.5e-64 250.4 279 50.9
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 1.3e-63 247.3 261 54.0
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 3.7e-63 245.7 250 54.8
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 3.2e-62 242.7 267 52.4
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.0e-61 238.4 255 53.3
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 1.9e-59 233.4 267 50.6
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 3.3e-59 232.6 220 56.4
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 3.3e-59 232.6 220 56.4
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 5.6e-59 231.9 266 50.0
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 2.1e-58 229.9 263 50.6
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.1e-58 229.9 219 56.6
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.4e-57 227.3 221 55.2
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.8e-57 226.9 252 50.0
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 1.8e-57 226.9 217 53.9
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 2.6e-56 223.0 229 50.2
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.6e-56 223.0 210 56.2
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.6e-56 223.0 232 50.4
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 3.4e-56 222.6 233 51.9
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 2.2e-55 219.9 254 50.0
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 2.2e-55 219.9 234 50.0
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 4.9e-55 218.8 257 49.0
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 6.4e-55 218.4 257 49.0
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 6.4e-55 218.4 257 49.0
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.1e-54 217.6 235 50.6
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.4e-54 217.2 253 47.8
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.2e-54 215.7 255 47.5
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 5.4e-54 215.3 228 52.2
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 5.4e-54 215.3 250 50.0
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 7.8e-53 211.5 237 49.4
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 3.3e-51 206.1 256 44.9
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.2e-50 204.1 267 43.4
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.8e-50 203.0 243 47.7
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.0e-49 199.1 248 45.6
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 1.5e-48 197.2 234 49.1
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.5e-48 197.2 197 52.8
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.5e-48 197.2 157 61.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.7e-47 193.7 234 47.0
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 2.2e-47 193.4 197 51.8
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.1e-46 191.0 262 44.7
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.4e-46 188.7 210 49.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 5.4e-46 188.7 237 46.8
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 7.1e-46 188.3 225 46.7
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.1e-45 186.8 210 48.6
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 3.5e-45 186.0 177 54.2
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 1.7e-44 183.7 254 42.9
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 2.5e-43 179.9 251 44.2
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 3.6e-42 176.0 185 50.8
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 3.6e-42 176.0 185 50.8
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 6.2e-42 175.3 153 58.2
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.4e-41 173.3 221 45.2
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 4.0e-41 172.6 218 45.9
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.2e-40 171.0 251 39.4
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 2.0e-40 170.2 200 48.0
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 5.8e-40 168.7 149 59.1
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 7.6e-40 168.3 269 40.1
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 9.9e-40 167.9 138 58.0
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.7e-39 167.2 249 38.6
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.8e-39 166.0 153 54.2
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 4.9e-39 165.6 147 58.5
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 4.9e-39 165.6 138 57.2
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.4e-38 164.1 153 53.6
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.3e-38 161.4 174 48.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.2e-37 161.0 239 39.7
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 2.7e-37 159.8 138 54.3
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 3.5e-37 159.5 207 46.9
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.0e-36 157.9 228 41.7
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 2.3e-36 156.8 149 56.4
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 3.0e-36 156.4 141 57.4
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 5.1e-36 155.6 137 59.1
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 5.1e-36 155.6 139 55.4
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 6.7e-36 155.2 152 51.3
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 8.7e-36 154.8 164 50.0
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 8.7e-36 154.8 142 57.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.5e-35 154.1 217 43.3
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.9e-35 153.7 142 57.0
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 4.3e-35 152.5 155 51.6
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 9.6e-35 151.4 142 54.9
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 1.6e-34 150.6 213 42.3
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 6.2e-34 148.7 155 50.3
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 8.1e-34 148.3 140 55.0
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.4e-33 147.5 142 52.8
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.5e-32 142.5 162 47.5
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 4.9e-31 139.0 151 49.0
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 6.4e-31 138.7 212 41.5
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.2e-30 136.0 146 49.3
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.5e-29 132.9 158 44.9
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.4e-25 120.9 238 34.0
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 3.1e-25 119.8 90 61.1
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 2.9e-23 113.2 233 33.0
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 5.5e-22 109.0 78 60.3
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 1.0e-20 104.8 154 37.7
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.2e-18 97.1 78 62.8
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 3.8e-15 86.3 81 53.1
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 2.5e-11 73.6 83 42.2
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 2.4e-09 67.0 74 41.9
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 5.3e-09 65.9 168 26.8
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 3.8e-07 59.7 84 34.5
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 3.2e-06 56.6 64 39.1


User provided reference genes

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