Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24047 Brassica carinata HOM05D011936 ORTHO05D014852 1.6e-25 118.6 60 100.0
BcaC03g14648 Brassica carinata HOM05D011936 ORTHO05D014852 9.8e-23 109.4 61 93.4
C02p20830 Brassica napus HOM05D011936 ORTHO05D014852 1.3e-22 109.0 60 93.3
BolC2t08223H Brassica oleracea HOM05D011936 ORTHO05D014852 1.3e-22 109.0 60 93.3
A02p12770 Brassica napus HOM05D011936 ORTHO05D014852 1.7e-22 108.6 60 93.3
BraA02t06334Z Brassica rapa HOM05D011936 ORTHO05D014852 1.7e-22 108.6 60 93.3
Carub.0008s1056 Capsella rubella HOM05D011936 ORTHO05D014852 4.3e-18 94.0 63 77.8
Sp6g12625 Schrenkiella parvula HOM05D011936 ORTHO05D014852 3.1e-16 87.8 64 75.0
SpUn0015_0010 Schrenkiella parvula HOM05D011936 ORTHO05D014852 3.1e-16 87.8 64 75.0
AT5G50443 Arabidopsis thaliana HOM05D011936 ORTHO05D014852 4.0e-16 87.4 69 66.7
AL8G24690 Arabidopsis lyrata HOM05D011936 ORTHO05D014852 8.9e-16 86.3 69 66.7
Thhalv10015176m.g Eutrema salsugineum HOM05D011936 ORTHO05D014852 1.4e-13 79.0 63 69.8
CARHR257850 Cardamine hirsuta HOM05D011936 ORTHO05D014852 5.6e-10 67.0 69 55.1
A10p08280 Brassica napus HOM05D011936 ORTHO05D041677 7.6e-07 56.6 39 76.9
BraSC35t45972Z Brassica rapa HOM05D011936 ORTHO05D041677 7.6e-07 56.6 39 76.9


User provided reference genes

Program Settings