Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24043 Brassica carinata HOM05D000160 ORTHO05D014058 2.1e-100 369.0 185 100.0
BcaC03g14644 Brassica carinata HOM05D000160 ORTHO05D014058 3.9e-62 241.9 200 68.0
C02p20790 Brassica napus HOM05D000160 ORTHO05D014058 3.9e-62 241.9 200 68.0
BolC2t08219H Brassica oleracea HOM05D000160 ORTHO05D014058 3.9e-62 241.9 200 68.0
A02p12730 Brassica napus HOM05D000160 ORTHO05D014058 6.2e-60 234.6 200 67.0
BraA02t06330Z Brassica rapa HOM05D000160 ORTHO05D014058 6.2e-60 234.6 200 67.0
Sp6g12680 Schrenkiella parvula HOM05D000160 ORTHO05D014058 7.2e-40 167.9 215 50.7
Sp6g12690 Schrenkiella parvula HOM05D000160 ORTHO05D014058 4.5e-34 148.7 209 46.4
Carub.0008s1048 Capsella rubella HOM05D000160 ORTHO05D000496 6.1e-15 85.1 138 38.4
Thhalv10015817m.g Eutrema salsugineum HOM05D000160 ORTHO05D014058 8.0e-15 84.7 146 37.0
Thhalv10015299m.g Eutrema salsugineum HOM05D000160 ORTHO05D014058 2.0e-13 80.1 129 38.8
CARHR258100 Cardamine hirsuta HOM05D000160 ORTHO05D014058 2.6e-13 79.7 132 40.2
AT5G50115 Arabidopsis thaliana HOM05D000160 ORTHO05D000496 4.1e-11 72.4 192 32.3
Carub.0008s1062 Capsella rubella HOM05D000160 ORTHO05D000496 4.1e-11 72.4 123 38.2
Carub.0008s1060 Capsella rubella HOM05D000160 ORTHO05D000496 1.2e-10 70.9 196 31.1
THA.LOC104811585 Tarenaya hassleriana HOM05D000160 ORTHO05D000496 1.2e-10 70.9 135 34.8
Carub.0008s1061 Capsella rubella HOM05D000160 ORTHO05D014058 3.5e-10 69.3 178 33.1
AT5G50510 Arabidopsis thaliana HOM05D000160 ORTHO05D014058 3.8e-09 65.9 192 31.2
AT5G50620 Arabidopsis thaliana HOM05D000160 ORTHO05D014058 3.8e-09 65.9 192 31.2
Peaxi162Scf00089g00022 Petunia axillaris HOM05D000160 ORTHO05D000496 9.5e-08 61.2 127 34.6
COL.COLO4_28138 Corchorus olitorius HOM05D000160 ORTHO05D000496 2.8e-07 59.7 126 35.7
Sc04g0000590 Simmondsia chinensis HOM05D000160 ORTHO05D000496 4.7e-07 58.9 126 34.1
HanXRQChr12g0385461 Helianthus annuus HOM05D000160 ORTHO05D000496 1.8e-06 57.0 184 27.2
Nitab4.5_0000624g0030 Nicotiana tabacum HOM05D000160 ORTHO05D000496 1.8e-06 57.0 124 33.9
Nitab4.5_0001311g0080 Nicotiana tabacum HOM05D000160 ORTHO05D000496 1.8e-06 57.0 141 32.6
Sed0005560 Sechium edule HOM05D000160 ORTHO05D000496 1.8e-06 57.0 126 31.0
ECA233G2940 Erigeron canadensis HOM05D000160 ORTHO05D000496 3.0e-06 56.2 126 33.3
vmacro19119 Vaccinium macrocarpon HOM05D000160 ORTHO05D000496 4.0e-06 55.8 178 28.7


User provided reference genes

Program Settings