Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 1.0e-157 560.1 286 100.0
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 3.1e-26 123.2 81 69.1
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 3.1e-26 123.2 81 69.1
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 3.1e-26 123.2 81 69.1
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.9e-24 116.7 78 71.8
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.9e-24 116.7 78 71.8
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 3.8e-24 116.3 78 70.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 1.5e-20 104.4 78 62.8
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.3e-19 101.3 78 62.8
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 6.3e-19 99.0 78 62.8
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.1e-18 98.2 78 62.8
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.1e-18 98.2 78 62.8
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.4e-18 97.1 78 62.8
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 2.4e-18 97.1 78 61.5
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 4.1e-18 96.3 67 68.7
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 4.1e-18 96.3 67 68.7
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 4.1e-18 96.3 67 68.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 9.1e-18 95.1 78 61.5
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 1.2e-17 94.7 69 69.6
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 1.3e-16 91.3 58 74.1
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 2.2e-16 90.5 78 60.3
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 5.0e-16 89.4 175 36.6
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 5.0e-16 89.4 175 36.6
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 5.0e-16 89.4 175 36.6
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 6.5e-16 89.0 136 44.1
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.5e-15 87.8 194 37.1
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 2.5e-15 87.0 149 39.6
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.8e-13 80.9 153 37.9
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.8e-13 80.9 149 38.9
BcaC05g28459 Brassica carinata HOM05D007694 ORTHO05D092653 4.4e-12 76.3 68 60.3
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 7.5e-12 75.5 194 34.5
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 1.3e-11 74.7 205 31.7
BcaC04g22328 Brassica carinata HOM05D000013 ORTHO05D000011 1.3e-11 74.7 58 65.5
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 2.8e-11 73.6 193 33.2
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 2.8e-11 73.6 54 64.8
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 3.7e-11 73.2 124 42.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 8.3e-11 72.0 188 34.0
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.4e-10 71.2 64 62.5
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 2.4e-10 70.5 147 35.4
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 9.2e-10 68.6 188 33.0
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 1.3e-08 64.7 140 32.9
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 2.9e-08 63.5 137 36.5
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 5.0e-08 62.8 203 32.5
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 6.6e-08 62.4 179 33.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 6.6e-08 62.4 55 63.6
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 6.6e-08 62.4 55 63.6
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 6.6e-08 62.4 55 63.6
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 8.6e-08 62.0 149 32.9
BcaC03g14420 Brassica carinata HOM05D030131 ORTHO05D021678 1.9e-07 60.8 35 77.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 4.3e-07 59.7 251 29.9
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 4.3e-07 59.7 153 34.6
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 7.3e-07 58.9 111 36.9
A10p16920 Brassica napus HOM05D000041 ORTHO05D000061 1.2e-06 58.2 46 69.6
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 1.6e-06 57.8 56 58.9
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 8.0e-06 55.5 172 31.4


User provided reference genes

Program Settings