Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23956 Brassica carinata HOM05D043708 ORTHO05D003600 1.5e-86 322.8 162 100.0
BcaB04g16943 Brassica carinata HOM05D043708 ORTHO05D003600 2.3e-74 282.3 150 92.7
BcaB03g16733 Brassica carinata HOM05D000411 ORTHO05D000310 1.2e-51 206.8 116 87.9
BcaC04g23165 Brassica carinata HOM05D003142 ORTHO05D003600 1.3e-29 133.7 119 61.3
AT5G66840 Arabidopsis thaliana HOM05D003142 ORTHO05D003600 1.7e-29 133.3 110 64.5
A09p09730 Brassica napus HOM05D003142 ORTHO05D003600 5.0e-29 131.7 119 62.2
BraA09t36620Z Brassica rapa HOM05D003142 ORTHO05D003600 5.0e-29 131.7 119 62.2
C09p11500 Brassica napus HOM05D003142 ORTHO05D003600 6.5e-29 131.3 119 60.5
BolC9t54039H Brassica oleracea HOM05D003142 ORTHO05D003600 6.5e-29 131.3 119 60.5
BcaB04g20095 Brassica carinata HOM05D003142 ORTHO05D003600 2.5e-28 129.4 119 59.7
Sp2g29820 Schrenkiella parvula HOM05D003142 ORTHO05D003600 8.0e-27 124.4 73 80.8
AL8G44560 Arabidopsis lyrata HOM05D003142 ORTHO05D003600 1.2e-22 110.5 82 65.9
CARHR280830 Cardamine hirsuta HOM05D003142 ORTHO05D003600 2.5e-20 102.8 113 57.5
Carub.0008s2765 Capsella rubella HOM05D003142 ORTHO05D003600 1.5e-17 93.6 112 50.0
Thhalv10004096m.g Eutrema salsugineum HOM05D003142 ORTHO05D003600 1.7e-16 90.1 99 52.5


User provided reference genes

Program Settings