Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23937 Brassica carinata HOM05D004230 ORTHO05D021768 2.8e-61 238.4 120 100.0
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-22 109.8 89 68.5
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-22 109.8 89 68.5
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 1.5e-22 109.8 89 68.5
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 1.5e-22 109.8 89 68.5
A01p37400 Brassica napus HOM05D004230 ORTHO05D021768 5.7e-22 107.8 86 69.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-22 107.5 89 67.4
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 7.5e-22 107.5 89 67.4
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 7.5e-22 107.5 89 67.4
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-20 103.2 63 84.1
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 2.7e-19 99.0 89 66.3
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 4.7e-16 88.2 89 55.1
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-15 86.7 89 55.1
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 4.0e-15 85.1 89 53.9
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 4.0e-15 85.1 89 53.9
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-14 82.0 89 52.8
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 9.1e-12 73.9 89 52.8
A01p32040 Brassica napus HOM05D004230 ORTHO05D021768 1.7e-10 69.7 59 59.3
CARHR034450 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.7e-10 69.7 63 52.4
C01p41060 Brassica napus HOM05D004230 ORTHO05D021768 1.5e-09 66.6 88 45.5
BolC1t04061H Brassica oleracea HOM05D004230 ORTHO05D021768 2.5e-09 65.9 52 63.5
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.6e-08 62.0 96 39.6
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 1.8e-07 59.7 63 49.2
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 1.8e-07 59.7 96 38.5
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-07 59.3 63 49.2
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 3.0e-07 58.9 96 37.5
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-06 56.6 70 44.3
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-06 56.6 70 44.3
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.6e-06 55.8 67 44.8
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 3.4e-06 55.5 82 41.5
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 3.4e-06 55.5 63 47.6
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-06 55.5 63 46.0
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-06 55.5 63 47.6
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-06 55.5 82 41.5
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 4.4e-06 55.1 82 40.2
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 4.4e-06 55.1 82 41.5
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 4.4e-06 55.1 63 47.6
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 5.7e-06 54.7 60 48.3
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 5.7e-06 54.7 63 46.0
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 9.8e-06 53.9 82 40.2
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 9.8e-06 53.9 82 40.2


User provided reference genes

Program Settings