Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-138 496.1 268 100.0
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 6.4e-74 281.6 373 51.5
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 7.4e-70 268.1 334 53.3
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-68 263.5 469 41.4
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 3.1e-68 262.7 336 50.3
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 4.9e-66 255.4 421 45.8
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 7.4e-62 241.5 390 46.7
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-59 233.8 423 43.3
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-57 226.9 388 45.4
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-56 223.4 276 50.7
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 1.3e-53 214.2 301 49.2
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 4.8e-53 212.2 392 44.1
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 6.3e-53 211.8 495 36.0
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 3.4e-51 206.1 379 43.0
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 3.8e-50 202.6 495 36.0
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 6.5e-50 201.8 390 42.3
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 8.5e-50 201.4 405 41.2
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 5.5e-49 198.7 357 46.5
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 5.5e-49 198.7 241 53.9
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 7.9e-48 194.9 244 53.3
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 1.4e-47 194.1 123 74.0
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 3.9e-47 192.6 123 75.6
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 3.9e-47 192.6 126 73.0
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 8.8e-47 191.4 407 40.5
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-44 184.1 417 38.8
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 1.4e-44 184.1 431 37.6
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-44 183.3 121 70.2
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 4.1e-44 182.6 369 39.6
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-43 179.9 123 69.9
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 2.9e-42 176.4 431 37.1
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 1.9e-41 173.7 302 42.1
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-40 171.0 314 42.0
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-40 169.5 253 46.2
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 6.7e-39 165.2 308 41.9
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 3.7e-37 159.5 421 35.9
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 4.8e-37 159.1 390 33.8
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-36 157.1 386 35.0
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 3.1e-36 156.4 354 37.9
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-35 154.1 473 33.2
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-34 150.2 384 36.7
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-34 149.8 101 74.3
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 8.5e-34 148.3 93 73.1
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 4.2e-33 146.0 99 68.7
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 4.2e-33 146.0 101 68.3
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 5.5e-33 145.6 336 33.9
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 5.7e-30 135.6 231 49.8
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 7.5e-30 135.2 211 46.9
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 2.4e-28 130.2 122 57.4
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 3.1e-28 129.8 320 35.0
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 3.1e-28 129.8 231 48.5
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 9.1e-28 128.3 188 46.3
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 1.2e-27 127.9 87 72.4
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 4.5e-27 125.9 123 54.5
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 2.5e-25 120.2 270 39.3
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-24 117.5 69 79.7
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 3.0e-23 113.2 162 58.0
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 2.0e-22 110.5 292 39.4
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-21 106.7 118 50.0
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 2.8e-21 106.7 69 71.0
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-20 104.4 67 71.6
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 1.4e-20 104.4 69 69.6
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 1.4e-20 104.4 69 69.6
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 7.0e-20 102.1 69 68.1
C04p14390 Brassica napus HOM05D003348 ORTHO05D013252 7.0e-20 102.1 105 61.9
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 7.0e-20 102.1 69 68.1
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 2.7e-19 100.1 69 68.1
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 2.7e-19 100.1 376 32.4
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 7.7e-19 98.6 323 35.6
BcaB04g17835 Brassica carinata HOM05D003348 ORTHO05D091710 3.8e-18 96.3 63 82.5
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 8.6e-18 95.1 162 50.6
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 3.6e-16 89.7 140 53.6
BolC9t58934H Brassica oleracea HOM05D003348 ORTHO05D013252 3.6e-16 89.7 105 58.1
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 1.8e-15 87.4 154 50.6
C03p79880 Brassica napus HOM05D003348 ORTHO05D013252 1.2e-14 84.7 105 55.2
BolC3t17625H Brassica oleracea HOM05D003348 ORTHO05D013252 1.3e-13 81.3 107 54.2
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 1.3e-13 81.3 53 69.8
C09p12220 Brassica napus HOM05D003348 ORTHO05D013252 4.9e-13 79.3 126 48.4
BraA08t33102Z Brassica rapa HOM05D003348 ORTHO05D013252 1.1e-12 78.2 90 58.9
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 4.1e-12 76.3 64 68.8
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 5.4e-12 75.9 64 68.8
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 7.0e-12 75.5 64 67.2
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-11 74.3 48 70.8
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 3.5e-11 73.2 74 62.2
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 4.5e-11 72.8 65 64.6
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 4.5e-11 72.8 65 64.6
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 2.3e-10 70.5 74 59.5
BcaC01g00441 Brassica carinata HOM05D003348 ORTHO05D013252 5.0e-10 69.3 90 54.4
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 5.0e-10 69.3 96 51.0
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 8.6e-10 68.6 76 59.2
BcaC04g23093 Brassica carinata HOM05D003348 ORTHO05D013252 1.1e-09 68.2 60 66.7
BolC9t54115H Brassica oleracea HOM05D003348 ORTHO05D013252 1.1e-09 68.2 60 66.7
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 7.3e-09 65.5 64 48.4
BcaC01g03324 Brassica carinata HOM05D003348 ORTHO05D013252 1.2e-08 64.7 90 52.2
C03p53650 Brassica napus HOM05D003348 ORTHO05D013252 1.2e-08 64.7 90 52.2
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.1e-08 63.9 106 28.3
C02p63790 Brassica napus HOM05D003348 ORTHO05D033327 6.1e-08 62.4 66 60.6
A09p17350 Brassica napus HOM05D003348 ORTHO05D033327 1.8e-07 60.8 66 59.1
BraA09t37364Z Brassica rapa HOM05D003348 ORTHO05D033327 1.8e-07 60.8 66 59.1
BcaB01g01243 Brassica carinata HOM05D003348 ORTHO05D095199 5.2e-07 59.3 34 88.2
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 6.8e-07 58.9 144 43.1
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-06 58.2 131 27.5
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.6e-06 57.0 101 21.8
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 2.6e-06 57.0 32 75.0
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-06 57.0 32 75.0


User provided reference genes

Program Settings